Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 AC084364.1-201ENST00000551967 1556 ntBASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 RPL13AP25-201ENST00000484130 612 ntBASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 AL049840.4-201ENST00000602422 811 ntBASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 AC012645.4-201ENST00000610691 1061 ntBASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 WFDC1-204ENST00000613603 549 ntBASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 AL139384.1-201ENST00000612143 3047 ntBASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ECHDC3Q96DC8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 AC090616.6-203ENST00000579186 1945 ntBASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 AP006294.1-201ENST00000415407 339 ntBASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 NME2P1-201ENST00000426182 414 ntBASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 AC026410.3-201ENST00000514280 936 ntBASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 AC124283.3-201ENST00000570869 594 ntBASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms