Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 KRT19P2-202ENST00000557173 1012 ntBASIC15.22■□□□□ 0.03
VPS33AQ96AX1 AC243562.2-201ENST00000561247 970 ntBASIC15.22■□□□□ 0.03
VPS33AQ96AX1 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 FAAHP1-202ENST00000446499 1238 ntBASIC15.21■□□□□ 0.03
VPS33AQ96AX1 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 Z83851.2-201ENST00000609564 659 ntBASIC15.21■□□□□ 0.03
VPS33AQ96AX1 AL161645.1-201ENST00000622716 1255 ntBASIC15.21■□□□□ 0.03
VPS33AQ96AX1 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
VPS33AQ96AX1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
VPS33AQ96AX1 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
VPS33AQ96AX1 KRT8P44-201ENST00000441609 1350 ntBASIC15.21■□□□□ 0.02
VPS33AQ96AX1 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
VPS33AQ96AX1 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
VPS33AQ96AX1 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
VPS33AQ96AX1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.02
VPS33AQ96AX1 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
VPS33AQ96AX1 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
VPS33AQ96AX1 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
VPS33AQ96AX1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 AC079776.4-201ENST00000511039 504 ntBASIC15.2■□□□□ 0.02
VPS33AQ96AX1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 AP001005.1-201ENST00000571755 1248 ntBASIC15.2■□□□□ 0.02
VPS33AQ96AX1 AC061975.2-201ENST00000581722 295 ntBASIC15.2■□□□□ 0.02
VPS33AQ96AX1 SLC25A6P4-201ENST00000586535 553 ntBASIC15.2■□□□□ 0.02
VPS33AQ96AX1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms