Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SVIPQ8NHG7 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
SVIPQ8NHG7 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SVIPQ8NHG7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SVIPQ8NHG7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SVIPQ8NHG7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC9.62□□□□□ -0.87
SVIPQ8NHG7 FO393409.1-201ENST00000399325 1372 ntBASIC9.62□□□□□ -0.87
SVIPQ8NHG7 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SVIPQ8NHG7 SEZ6L2-204ENST00000537485 3423 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
SVIPQ8NHG7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC9.62□□□□□ -0.87
SVIPQ8NHG7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SVIPQ8NHG7 HSPA8-222ENST00000534319 1884 ntTSL 2 BASIC9.62□□□□□ -0.87
SVIPQ8NHG7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 MED6-202ENST00000430055 1507 ntTSL 2 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 ZNF142-201ENST00000411696 5926 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 FGFR1-208ENST00000397108 2870 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 STAT6-204ENST00000538913 2879 ntTSL 2 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 SLC22A16-201ENST00000330550 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 SLFN5-202ENST00000542451 2540 ntTSL 2 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 COL20A1-201ENST00000358894 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 RCVRN-201ENST00000226193 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 RPS10P7-201ENST00000441932 2329 ntTSL 2 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 Z97192.1-201ENST00000391625 3894 ntTSL 2 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 PRDM1-201ENST00000369089 4675 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 NLRX1-203ENST00000409265 3665 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 RNU6-233P-201ENST00000410845 141 ntBASIC9.61□□□□□ -0.87
SVIPQ8NHG7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 ZNF90P3-201ENST00000450345 1192 ntBASIC9.61□□□□□ -0.87
SVIPQ8NHG7 PRAMENP-201ENST00000337471 3038 ntTSL 2 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 MXRA5Y-201ENST00000420610 8000 ntBASIC9.61□□□□□ -0.87
SVIPQ8NHG7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 TIAM2-206ENST00000456877 3275 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 GIMAP6-201ENST00000328902 3440 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 AC013268.3-201ENST00000262716 2324 ntBASIC9.61□□□□□ -0.87
SVIPQ8NHG7 ADGRE5-203ENST00000358600 2751 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 NLRP12-203ENST00000391772 3205 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 AL023755.1-202ENST00000636459 1665 ntTSL 5 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 ZNF674-201ENST00000414387 2274 ntAPPRIS ALT2 TSL 3 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 ATP2C2-202ENST00000416219 3472 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 NUMA1-202ENST00000358965 7227 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
SVIPQ8NHG7 ZNF789-209ENST00000483089 2994 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 SUCLG2-AS1-202ENST00000482677 2226 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 CES5A-204ENST00000520435 1948 ntTSL 5 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 BCL2L12-213ENST00000619007 1630 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 AGK-201ENST00000355413 3849 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 SUPT5H-203ENST00000402194 3698 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 PLA2G4C-201ENST00000354276 2496 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 UQCC1-202ENST00000359226 2036 ntTSL 4 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 DLGAP4-203ENST00000373907 3337 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 NLRC5-203ENST00000436936 6724 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC9.6□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms