Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTL9Q8NET4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTL9Q8NET4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTL9Q8NET4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.23■□□□□ 0.67
RTL9Q8NET4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTL9Q8NET4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.23■□□□□ 0.67
RTL9Q8NET4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC19.23■□□□□ 0.67
RTL9Q8NET4 FAM21FP-201ENST00000426241 1131 ntBASIC19.23■□□□□ 0.67
RTL9Q8NET4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.23■□□□□ 0.67
RTL9Q8NET4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC19.23■□□□□ 0.67
RTL9Q8NET4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.23■□□□□ 0.67
RTL9Q8NET4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC19.23■□□□□ 0.67
RTL9Q8NET4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTL9Q8NET4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.23■□□□□ 0.67
RTL9Q8NET4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RTL9Q8NET4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC19.23■□□□□ 0.67
RTL9Q8NET4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC19.23■□□□□ 0.67
RTL9Q8NET4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTL9Q8NET4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTL9Q8NET4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTL9Q8NET4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTL9Q8NET4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTL9Q8NET4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTL9Q8NET4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.23■□□□□ 0.67
RTL9Q8NET4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTL9Q8NET4 AC018695.7-201ENST00000624587 2492 ntBASIC19.23■□□□□ 0.67
RTL9Q8NET4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RTL9Q8NET4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTL9Q8NET4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL9Q8NET4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.22■□□□□ 0.67
RTL9Q8NET4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL9Q8NET4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL9Q8NET4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTL9Q8NET4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL9Q8NET4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL9Q8NET4 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.22■□□□□ 0.67
RTL9Q8NET4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.22■□□□□ 0.67
RTL9Q8NET4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.22■□□□□ 0.67
RTL9Q8NET4 ACTBP8-201ENST00000403258 1108 ntBASIC19.22■□□□□ 0.67
RTL9Q8NET4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RTL9Q8NET4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.22■□□□□ 0.67
RTL9Q8NET4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTL9Q8NET4 DUX4L45-201ENST00000566406 1057 ntBASIC19.22■□□□□ 0.67
RTL9Q8NET4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.22■□□□□ 0.67
RTL9Q8NET4 AC008687.7-202ENST00000637404 953 ntBASIC19.22■□□□□ 0.67
RTL9Q8NET4 PRSS30P-206ENST00000641773 873 ntBASIC19.22■□□□□ 0.67
RTL9Q8NET4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RTL9Q8NET4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RTL9Q8NET4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL9Q8NET4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL9Q8NET4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL9Q8NET4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL9Q8NET4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL9Q8NET4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RTL9Q8NET4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.22■□□□□ 0.67
RTL9Q8NET4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.22■□□□□ 0.67
RTL9Q8NET4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC19.22■□□□□ 0.67
RTL9Q8NET4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTL9Q8NET4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.22■□□□□ 0.67
RTL9Q8NET4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL9Q8NET4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL9Q8NET4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.21■□□□□ 0.67
RTL9Q8NET4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL9Q8NET4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL9Q8NET4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTL9Q8NET4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL9Q8NET4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC19.21■□□□□ 0.67
RTL9Q8NET4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
RTL9Q8NET4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RTL9Q8NET4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL9Q8NET4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.21■□□□□ 0.67
RTL9Q8NET4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC19.21■□□□□ 0.67
RTL9Q8NET4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC19.21■□□□□ 0.67
RTL9Q8NET4 IGHV3OR16-16-201ENST00000563644 343 ntBASIC19.21■□□□□ 0.67
RTL9Q8NET4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.21■□□□□ 0.67
RTL9Q8NET4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RTL9Q8NET4 AC009542.2-202ENST00000619004 1067 ntBASIC19.21■□□□□ 0.67
RTL9Q8NET4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL9Q8NET4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTL9Q8NET4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC19.21■□□□□ 0.67
RTL9Q8NET4 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.21■□□□□ 0.67
RTL9Q8NET4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
RTL9Q8NET4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RTL9Q8NET4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.21■□□□□ 0.67
RTL9Q8NET4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RTL9Q8NET4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL9Q8NET4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTL9Q8NET4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC19.21■□□□□ 0.67
RTL9Q8NET4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RTL9Q8NET4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.21■□□□□ 0.67
RTL9Q8NET4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL9Q8NET4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.2■□□□□ 0.66
RTL9Q8NET4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTL9Q8NET4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTL9Q8NET4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTL9Q8NET4 AC026954.1-201ENST00000429771 1293 ntBASIC19.2■□□□□ 0.66
RTL9Q8NET4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTL9Q8NET4 KRT18P25-201ENST00000508931 1278 ntBASIC19.2■□□□□ 0.66
RTL9Q8NET4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.2■□□□□ 0.66
RTL9Q8NET4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms