Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 AL133267.1-201ENST00000398220 340 ntBASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 AL158212.4-201ENST00000624062 1286 ntBASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 AC087481.3-201ENST00000602886 1894 ntBASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
ZIC4Q8N9L1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
ZIC4Q8N9L1 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 CLK3P2-201ENST00000427566 1453 ntBASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 KRT18P43-201ENST00000469825 1281 ntBASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 TPRX2P-201ENST00000535362 881 ntBASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 RARRES2P5-201ENST00000564013 466 ntBASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 TMBIM7P-203ENST00000641617 1718 ntBASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC4Q8N9L1 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms