Protein–RNA interactions for Protein: Q8N815

CNTD1, Cyclin N-terminal domain-containing protein 1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1Q8N815 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTD1Q8N815 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CNTD1Q8N815 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.05■□□□□ 0.16
CNTD1Q8N815 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.05■□□□□ 0.16
CNTD1Q8N815 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTD1Q8N815 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTD1Q8N815 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTD1Q8N815 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNTD1Q8N815 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTD1Q8N815 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CNTD1Q8N815 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNTD1Q8N815 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CNTD1Q8N815 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTD1Q8N815 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNTD1Q8N815 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTD1Q8N815 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTD1Q8N815 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.05■□□□□ 0.16
CNTD1Q8N815 AC055876.3-201ENST00000431496 288 ntBASIC16.05■□□□□ 0.16
CNTD1Q8N815 KRT18P64-201ENST00000434946 1219 ntBASIC16.05■□□□□ 0.16
CNTD1Q8N815 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.05■□□□□ 0.16
CNTD1Q8N815 RN7SL618P-201ENST00000477850 296 ntBASIC16.05■□□□□ 0.16
CNTD1Q8N815 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.05■□□□□ 0.16
CNTD1Q8N815 AC138649.4-201ENST00000612222 287 ntBASIC16.05■□□□□ 0.16
CNTD1Q8N815 AC106028.4-201ENST00000614509 607 ntBASIC16.05■□□□□ 0.16
CNTD1Q8N815 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.05■□□□□ 0.16
CNTD1Q8N815 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.05■□□□□ 0.16
CNTD1Q8N815 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTD1Q8N815 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CNTD1Q8N815 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CNTD1Q8N815 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CNTD1Q8N815 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNTD1Q8N815 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTD1Q8N815 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CNTD1Q8N815 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTD1Q8N815 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.05■□□□□ 0.16
CNTD1Q8N815 AC006058.4-201ENST00000624016 1670 ntBASIC16.05■□□□□ 0.16
CNTD1Q8N815 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNTD1Q8N815 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.05■□□□□ 0.16
CNTD1Q8N815 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTD1Q8N815 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTD1Q8N815 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTD1Q8N815 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNTD1Q8N815 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTD1Q8N815 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTD1Q8N815 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTD1Q8N815 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTD1Q8N815 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNTD1Q8N815 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTD1Q8N815 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNTD1Q8N815 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTD1Q8N815 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 PMS2P2-201ENST00000425039 1128 ntBASIC16.04■□□□□ 0.16
CNTD1Q8N815 RPL13P2-201ENST00000440687 659 ntBASIC16.04■□□□□ 0.16
CNTD1Q8N815 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 RFPL4AP1-201ENST00000530883 850 ntBASIC16.04■□□□□ 0.16
CNTD1Q8N815 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNTD1Q8N815 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNTD1Q8N815 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 AC044860.1-202ENST00000559481 777 ntBASIC16.04■□□□□ 0.16
CNTD1Q8N815 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNTD1Q8N815 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTD1Q8N815 AC068418.2-201ENST00000577309 3703 ntBASIC16.04■□□□□ 0.16
CNTD1Q8N815 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTD1Q8N815 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTD1Q8N815 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTD1Q8N815 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTD1Q8N815 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNTD1Q8N815 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTD1Q8N815 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNTD1Q8N815 AC112693.3-201ENST00000624819 1983 ntBASIC16.04■□□□□ 0.16
CNTD1Q8N815 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CNTD1Q8N815 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTD1Q8N815 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNTD1Q8N815 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTD1Q8N815 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms