Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIML2Q8N7C3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.35■□□□□ 0.05
TRIML2Q8N7C3 AC016027.1-202ENST00000607927 1699 ntBASIC15.35■□□□□ 0.05
TRIML2Q8N7C3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIML2Q8N7C3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TRIML2Q8N7C3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 LINC01101-201ENST00000622953 1884 ntBASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 AC008677.1-201ENST00000519230 1561 ntBASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 AC007686.3-201ENST00000619017 3487 ntBASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 AC026396.1-201ENST00000419388 421 ntBASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 AC092474.2-201ENST00000424288 719 ntBASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 AC079776.4-201ENST00000511039 504 ntBASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 RNA5SP415-201ENST00000517246 115 ntBASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 AP003680.1-201ENST00000598970 3660 ntBASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIML2Q8N7C3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIML2Q8N7C3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIML2Q8N7C3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
TRIML2Q8N7C3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.33■□□□□ 0.05
TRIML2Q8N7C3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRIML2Q8N7C3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIML2Q8N7C3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIML2Q8N7C3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIML2Q8N7C3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.33■□□□□ 0.05
TRIML2Q8N7C3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.33■□□□□ 0.05
TRIML2Q8N7C3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIML2Q8N7C3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIML2Q8N7C3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIML2Q8N7C3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
TRIML2Q8N7C3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIML2Q8N7C3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRIML2Q8N7C3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRIML2Q8N7C3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIML2Q8N7C3 AC140658.5-201ENST00000438532 169 ntBASIC15.33■□□□□ 0.04
TRIML2Q8N7C3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIML2Q8N7C3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIML2Q8N7C3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TRIML2Q8N7C3 AC104692.2-201ENST00000603054 253 ntBASIC15.33■□□□□ 0.04
TRIML2Q8N7C3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRIML2Q8N7C3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIML2Q8N7C3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIML2Q8N7C3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIML2Q8N7C3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIML2Q8N7C3 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.33■□□□□ 0.04
TRIML2Q8N7C3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIML2Q8N7C3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
TRIML2Q8N7C3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIML2Q8N7C3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRIML2Q8N7C3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIML2Q8N7C3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIML2Q8N7C3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIML2Q8N7C3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIML2Q8N7C3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIML2Q8N7C3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRIML2Q8N7C3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIML2Q8N7C3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIML2Q8N7C3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRIML2Q8N7C3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIML2Q8N7C3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIML2Q8N7C3 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIML2Q8N7C3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms