Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 CICP13-201ENST00000422015 2789 ntBASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 MTND6P24-201ENST00000440466 518 ntBASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 AC023511.2-201ENST00000618803 211 ntBASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
TTC9CQ8N5M4 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 TMBIM7P-203ENST00000641617 1718 ntBASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 AZGP1P1-201ENST00000411909 902 ntBASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 AC136604.1-201ENST00000418535 575 ntBASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 TSEN15P1-201ENST00000423257 515 ntBASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 HNRNPUP1-201ENST00000554987 333 ntBASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 AL079307.3-201ENST00000556114 283 ntBASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 AC097359.3-201ENST00000603982 1210 ntBASIC12.49□□□□□ -0.41
TTC9CQ8N5M4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms