Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC21.3■■□□□ 1
XRN1Q8IZH2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC21.3■■□□□ 1
XRN1Q8IZH2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.3■■□□□ 1
XRN1Q8IZH2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC21.3■■□□□ 1
XRN1Q8IZH2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
XRN1Q8IZH2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
XRN1Q8IZH2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC21.3■■□□□ 1
XRN1Q8IZH2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.3■■□□□ 1
XRN1Q8IZH2 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
XRN1Q8IZH2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC21.3■■□□□ 1
XRN1Q8IZH2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
XRN1Q8IZH2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
XRN1Q8IZH2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC21.3■■□□□ 1
XRN1Q8IZH2 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
XRN1Q8IZH2 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC21.29■■□□□ 1
XRN1Q8IZH2 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC21.29■■□□□ 1
XRN1Q8IZH2 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC21.29■■□□□ 1
XRN1Q8IZH2 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC21.29■■□□□ 1
XRN1Q8IZH2 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC21.29■■□□□ 1
XRN1Q8IZH2 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC21.29■■□□□ 1
XRN1Q8IZH2 AL353726.2-201ENST00000623259 884 ntBASIC21.29■■□□□ 1
XRN1Q8IZH2 AC006453.1-201ENST00000636037 1257 ntBASIC21.29■■□□□ 1
XRN1Q8IZH2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
XRN1Q8IZH2 AC018695.7-201ENST00000624587 2492 ntBASIC21.29■■□□□ 1
XRN1Q8IZH2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
XRN1Q8IZH2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.29■■□□□ 1
XRN1Q8IZH2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
XRN1Q8IZH2 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
XRN1Q8IZH2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
XRN1Q8IZH2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
XRN1Q8IZH2 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
XRN1Q8IZH2 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC21.29■■□□□ 1
XRN1Q8IZH2 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC21.29■■□□□ 1
XRN1Q8IZH2 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC21.29■■□□□ 1
XRN1Q8IZH2 PFN2-202ENST00000423691 911 ntTSL 2 BASIC21.29■■□□□ 1
XRN1Q8IZH2 AC006335.1-201ENST00000445200 547 ntBASIC21.29■■□□□ 1
XRN1Q8IZH2 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC21.29■■□□□ 1
XRN1Q8IZH2 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC21.29■■□□□ 1
XRN1Q8IZH2 RTN3P1-201ENST00000536295 711 ntBASIC21.29■■□□□ 1
XRN1Q8IZH2 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC21.29■■□□□ 1
XRN1Q8IZH2 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC21.29■■□□□ 1
XRN1Q8IZH2 IRF3-215ENST00000596822 823 ntTSL 3 BASIC21.29■■□□□ 1
XRN1Q8IZH2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC21.29■■□□□ 1
XRN1Q8IZH2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC21.29■■□□□ 1
XRN1Q8IZH2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC21.29■■□□□ 1
XRN1Q8IZH2 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
XRN1Q8IZH2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC21.28■■□□□ 1
XRN1Q8IZH2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
XRN1Q8IZH2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
XRN1Q8IZH2 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
XRN1Q8IZH2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.28■■□□□ 1
XRN1Q8IZH2 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
XRN1Q8IZH2 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC21.28■■□□□ 1
XRN1Q8IZH2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC21.28■■□□□ 1
XRN1Q8IZH2 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
XRN1Q8IZH2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC21.28■■□□□ 1
XRN1Q8IZH2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
XRN1Q8IZH2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC21.28■■□□□ 1
XRN1Q8IZH2 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
XRN1Q8IZH2 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
XRN1Q8IZH2 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC21.28■■□□□ 1
XRN1Q8IZH2 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
XRN1Q8IZH2 TUBB8P8-201ENST00000458717 1058 ntBASIC21.28■■□□□ 1
XRN1Q8IZH2 HNRNPA1P36-201ENST00000521313 955 ntBASIC21.28■■□□□ 1
XRN1Q8IZH2 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC21.28■■□□□ 1
XRN1Q8IZH2 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
XRN1Q8IZH2 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC21.28■■□□□ 1
XRN1Q8IZH2 WDR7-208ENST00000589935 544 ntTSL 4 BASIC21.28■■□□□ 1
XRN1Q8IZH2 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC21.28■■□□□ 1
XRN1Q8IZH2 COX6A1P2-201ENST00000620597 330 ntBASIC21.28■■□□□ 1
XRN1Q8IZH2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC21.28■■□□□ 1
XRN1Q8IZH2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
XRN1Q8IZH2 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC21.28■■□□□ 1
XRN1Q8IZH2 AGGF1P2-201ENST00000426656 2106 ntBASIC21.28■■□□□ 1
XRN1Q8IZH2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
XRN1Q8IZH2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC21.28■■□□□ 1
XRN1Q8IZH2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
XRN1Q8IZH2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC21.28■■□□□ 1
XRN1Q8IZH2 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
XRN1Q8IZH2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
XRN1Q8IZH2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21.27■■□□□ 1
XRN1Q8IZH2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
XRN1Q8IZH2 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC21.27■■□□□ 1
XRN1Q8IZH2 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC21.27■■□□□ 1
XRN1Q8IZH2 CTBP2P4-201ENST00000513884 920 ntBASIC21.27■■□□□ 1
XRN1Q8IZH2 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC21.27■■□□□ 1
XRN1Q8IZH2 AC012044.1-201ENST00000603431 297 ntBASIC21.27■■□□□ 1
XRN1Q8IZH2 AC138696.2-201ENST00000607376 223 ntBASIC21.27■■□□□ 1
XRN1Q8IZH2 AC002472.3-201ENST00000640124 621 ntBASIC21.27■■□□□ 1
XRN1Q8IZH2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
XRN1Q8IZH2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
XRN1Q8IZH2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
XRN1Q8IZH2 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21.27■■□□□ 1
XRN1Q8IZH2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC21.27■■□□□ 1
XRN1Q8IZH2 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
XRN1Q8IZH2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
XRN1Q8IZH2 AC009093.2-202ENST00000620513 2079 ntBASIC21.27■■□□□ 1
XRN1Q8IZH2 SHC1P1-201ENST00000425230 1745 ntBASIC21.27■■□□□ 1
XRN1Q8IZH2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
XRN1Q8IZH2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms