Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 AL607033.1-201ENST00000623900 1599 ntBASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 PPT1-215ENST00000641471 2368 ntBASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 CNN2P2-201ENST00000443536 909 ntBASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 CNN2P3-201ENST00000450201 906 ntBASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 AL136317.3-201ENST00000618497 906 ntBASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 AC093028.1-201ENST00000622998 982 ntBASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC116Q8IYX3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 AC013268.4-201ENST00000637413 2228 ntBASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 DBET-201ENST00000630918 3363 ntBASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 AC144831.1-201ENST00000573312 2656 ntBASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 RPL37AP1-201ENST00000412502 279 ntBASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 AC125807.1-201ENST00000483097 614 ntBASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 AC127383.1-201ENST00000444697 1800 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms