Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 ACKR1-201ENST00000368121 1240 ntBASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 AC004945.1-201ENST00000416738 983 ntBASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 AC006033.1-201ENST00000440505 426 ntBASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 KRT8P13-201ENST00000463294 1010 ntBASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 AC026410.3-201ENST00000514280 936 ntBASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 AC000095.1-201ENST00000603208 874 ntBASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 DRD5P1-201ENST00000456605 1438 ntBASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TMEFF1Q8IYR6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.09
TMEFF1Q8IYR6 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.58■□□□□ 0.09
TMEFF1Q8IYR6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
TMEFF1Q8IYR6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.58■□□□□ 0.09
TMEFF1Q8IYR6 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TMEFF1Q8IYR6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TMEFF1Q8IYR6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 CNN2P8-201ENST00000421872 913 ntBASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 FAM86HP-204ENST00000513466 959 ntBASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 AL022328.3-201ENST00000607943 679 ntBASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.58■□□□□ 0.08
TMEFF1Q8IYR6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms