Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 FAM90A7P-201ENST00000382628 1395 ntBASIC21.77■■□□□ 1.08
UBR1Q8IWV7 FAM90A23P-201ENST00000400136 1395 ntBASIC21.77■■□□□ 1.08
UBR1Q8IWV7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 FLJ38576-201ENST00000623820 2459 ntBASIC21.77■■□□□ 1.08
UBR1Q8IWV7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
UBR1Q8IWV7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
UBR1Q8IWV7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
UBR1Q8IWV7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
UBR1Q8IWV7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC21.77■■□□□ 1.07
UBR1Q8IWV7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
UBR1Q8IWV7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC21.77■■□□□ 1.07
UBR1Q8IWV7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
UBR1Q8IWV7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
UBR1Q8IWV7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC21.76■■□□□ 1.07
UBR1Q8IWV7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
UBR1Q8IWV7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
UBR1Q8IWV7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBR1Q8IWV7 DNAJB1P1-201ENST00000429417 1024 ntBASIC21.76■■□□□ 1.07
UBR1Q8IWV7 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC21.76■■□□□ 1.07
UBR1Q8IWV7 RPL18P13-201ENST00000478088 569 ntBASIC21.76■■□□□ 1.07
UBR1Q8IWV7 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC21.76■■□□□ 1.07
UBR1Q8IWV7 AC138696.2-201ENST00000607376 223 ntBASIC21.76■■□□□ 1.07
UBR1Q8IWV7 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBR1Q8IWV7 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBR1Q8IWV7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
UBR1Q8IWV7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.76■■□□□ 1.07
UBR1Q8IWV7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
UBR1Q8IWV7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBR1Q8IWV7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.76■■□□□ 1.07
UBR1Q8IWV7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
UBR1Q8IWV7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
UBR1Q8IWV7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC21.76■■□□□ 1.07
UBR1Q8IWV7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC21.76■■□□□ 1.07
UBR1Q8IWV7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 OR2K2-202ENST00000374428 1038 ntBASIC21.75■■□□□ 1.07
UBR1Q8IWV7 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 NAP1L6-202ENST00000641404 1222 ntBASIC21.75■■□□□ 1.07
UBR1Q8IWV7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC21.75■■□□□ 1.07
UBR1Q8IWV7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC21.74■■□□□ 1.07
UBR1Q8IWV7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
UBR1Q8IWV7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
UBR1Q8IWV7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBR1Q8IWV7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
UBR1Q8IWV7 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
UBR1Q8IWV7 FKBP4P6-201ENST00000457486 1332 ntBASIC21.74■■□□□ 1.07
UBR1Q8IWV7 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC21.74■■□□□ 1.07
UBR1Q8IWV7 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBR1Q8IWV7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBR1Q8IWV7 MBLAC2-202ENST00000514906 1936 ntBASIC21.74■■□□□ 1.07
UBR1Q8IWV7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms