Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 Z97180.1-201ENST00000445173 988 ntBASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 ENPP7P14-201ENST00000621765 1040 ntBASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 AC135983.4-201ENST00000564116 1262 ntBASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 AL162426.1-201ENST00000624141 743 ntBASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 AL354989.2-201ENST00000435838 1540 ntBASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 RPSAP31-201ENST00000416648 895 ntBASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 AL450472.2-201ENST00000603663 1156 ntBASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 AC124067.4-201ENST00000519691 2379 ntBASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 AL596276.2-201ENST00000447525 331 ntBASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 AC141586.1-203ENST00000567242 366 ntBASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 MEG3_2.1-201ENST00000611456 105 ntBASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 GPR39-203ENST00000622084 900 ntTSL 5 BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 MTHFR-217ENST00000641820 1569 ntBASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 ATP6V0CP2-201ENST00000469409 207 ntBASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 SLC9A7P1-202ENST00000556476 2239 ntBASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 KLF2P2-201ENST00000416807 1039 ntBASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 IFT20-206ENST00000578122 834 ntTSL 2 BASIC9.49□□□□□ -0.89
VPS13BQ7Z7G8 IFT20-208ENST00000578985 831 ntTSL 3 BASIC9.49□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms