Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHFQ7M4L6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHFQ7M4L6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SHFQ7M4L6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.33□□□□□ -0.12
SHFQ7M4L6 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
SHFQ7M4L6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.33□□□□□ -0.12
SHFQ7M4L6 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHFQ7M4L6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SHFQ7M4L6 WASH6P-202ENST00000359512 1437 ntBASIC14.32□□□□□ -0.12
SHFQ7M4L6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SHFQ7M4L6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.32□□□□□ -0.12
SHFQ7M4L6 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SHFQ7M4L6 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SHFQ7M4L6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SHFQ7M4L6 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.32□□□□□ -0.12
SHFQ7M4L6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SHFQ7M4L6 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
SHFQ7M4L6 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SHFQ7M4L6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SHFQ7M4L6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.32□□□□□ -0.12
SHFQ7M4L6 MRPL3P1-201ENST00000400109 1033 ntBASIC14.32□□□□□ -0.12
SHFQ7M4L6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.32□□□□□ -0.12
SHFQ7M4L6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.32□□□□□ -0.12
SHFQ7M4L6 RNA5SP419-201ENST00000515908 135 ntBASIC14.32□□□□□ -0.12
SHFQ7M4L6 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.32□□□□□ -0.12
SHFQ7M4L6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.32□□□□□ -0.12
SHFQ7M4L6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.32□□□□□ -0.12
SHFQ7M4L6 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.32□□□□□ -0.12
SHFQ7M4L6 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SHFQ7M4L6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.32□□□□□ -0.12
SHFQ7M4L6 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.32□□□□□ -0.12
SHFQ7M4L6 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.32□□□□□ -0.12
SHFQ7M4L6 AC025580.3-201ENST00000617932 1424 ntBASIC14.32□□□□□ -0.12
SHFQ7M4L6 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHFQ7M4L6 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHFQ7M4L6 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHFQ7M4L6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHFQ7M4L6 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHFQ7M4L6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHFQ7M4L6 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHFQ7M4L6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHFQ7M4L6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHFQ7M4L6 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHFQ7M4L6 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHFQ7M4L6 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHFQ7M4L6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHFQ7M4L6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHFQ7M4L6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHFQ7M4L6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 GPX1P2-201ENST00000429271 606 ntBASIC14.31□□□□□ -0.12
SHFQ7M4L6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 PRYP6-201ENST00000514804 343 ntBASIC14.31□□□□□ -0.12
SHFQ7M4L6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHFQ7M4L6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 AC004877.2-201ENST00000623941 599 ntBASIC14.31□□□□□ -0.12
SHFQ7M4L6 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHFQ7M4L6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHFQ7M4L6 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms