Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC20.7■□□□□ 0.9
USP31Q70CQ4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.7■□□□□ 0.9
USP31Q70CQ4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC20.7■□□□□ 0.9
USP31Q70CQ4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC20.7■□□□□ 0.9
USP31Q70CQ4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
USP31Q70CQ4 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP31Q70CQ4 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC20.7■□□□□ 0.9
USP31Q70CQ4 CSH2-202ENST00000345366 598 ntTSL 5 BASIC20.7■□□□□ 0.9
USP31Q70CQ4 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP31Q70CQ4 HNRNPA1P32-201ENST00000396326 963 ntBASIC20.7■□□□□ 0.9
USP31Q70CQ4 AC004945.1-201ENST00000416738 983 ntBASIC20.7■□□□□ 0.9
USP31Q70CQ4 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC20.7■□□□□ 0.9
USP31Q70CQ4 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC20.7■□□□□ 0.9
USP31Q70CQ4 HIST2H2BC-201ENST00000498492 580 ntBASIC20.7■□□□□ 0.9
USP31Q70CQ4 AL391280.1-201ENST00000506969 1062 ntBASIC20.7■□□□□ 0.9
USP31Q70CQ4 AC022616.1-201ENST00000518688 554 ntBASIC20.7■□□□□ 0.9
USP31Q70CQ4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC20.7■□□□□ 0.9
USP31Q70CQ4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC20.7■□□□□ 0.9
USP31Q70CQ4 PPY2P-201ENST00000582808 702 ntBASIC20.7■□□□□ 0.9
USP31Q70CQ4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP31Q70CQ4 ZACNP1-201ENST00000612259 710 ntBASIC20.7■□□□□ 0.9
USP31Q70CQ4 AC244157.2-201ENST00000616239 1006 ntBASIC20.7■□□□□ 0.9
USP31Q70CQ4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC20.69■□□□□ 0.9
USP31Q70CQ4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC20.69■□□□□ 0.9
USP31Q70CQ4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP31Q70CQ4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP31Q70CQ4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP31Q70CQ4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP31Q70CQ4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP31Q70CQ4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC20.69■□□□□ 0.9
USP31Q70CQ4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
USP31Q70CQ4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
USP31Q70CQ4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.69■□□□□ 0.9
USP31Q70CQ4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP31Q70CQ4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP31Q70CQ4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP31Q70CQ4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC20.69■□□□□ 0.9
USP31Q70CQ4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
USP31Q70CQ4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC20.69■□□□□ 0.9
USP31Q70CQ4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP31Q70CQ4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP31Q70CQ4 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP31Q70CQ4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
USP31Q70CQ4 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC20.69■□□□□ 0.9
USP31Q70CQ4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC20.69■□□□□ 0.9
USP31Q70CQ4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP31Q70CQ4 IGHJ2P-201ENST00000454480 60 ntBASIC20.69■□□□□ 0.9
USP31Q70CQ4 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP31Q70CQ4 RNA5SP423-201ENST00000517127 109 ntBASIC20.69■□□□□ 0.9
USP31Q70CQ4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC20.69■□□□□ 0.9
USP31Q70CQ4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC20.69■□□□□ 0.9
USP31Q70CQ4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
USP31Q70CQ4 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP31Q70CQ4 PPA1-206ENST00000625364 644 ntTSL 5 BASIC20.69■□□□□ 0.9
USP31Q70CQ4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.69■□□□□ 0.9
USP31Q70CQ4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP31Q70CQ4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP31Q70CQ4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP31Q70CQ4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
USP31Q70CQ4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
USP31Q70CQ4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP31Q70CQ4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP31Q70CQ4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC20.68■□□□□ 0.9
USP31Q70CQ4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP31Q70CQ4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP31Q70CQ4 SMS-201ENST00000379404 1174 ntTSL 3 BASIC20.68■□□□□ 0.9
USP31Q70CQ4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
USP31Q70CQ4 PTPA-218ENST00000435132 618 ntTSL 2 BASIC20.68■□□□□ 0.9
USP31Q70CQ4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC20.68■□□□□ 0.9
USP31Q70CQ4 REEP1-202ENST00000453231 940 ntTSL 2 BASIC20.68■□□□□ 0.9
USP31Q70CQ4 AC126915.1-201ENST00000522847 1038 ntBASIC20.68■□□□□ 0.9
USP31Q70CQ4 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC20.68■□□□□ 0.9
USP31Q70CQ4 AC009090.5-201ENST00000624886 2285 ntBASIC20.68■□□□□ 0.9
USP31Q70CQ4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP31Q70CQ4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
USP31Q70CQ4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC20.68■□□□□ 0.9
USP31Q70CQ4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP31Q70CQ4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
USP31Q70CQ4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP31Q70CQ4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP31Q70CQ4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP31Q70CQ4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP31Q70CQ4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP31Q70CQ4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP31Q70CQ4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC20.67■□□□□ 0.9
USP31Q70CQ4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP31Q70CQ4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP31Q70CQ4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
USP31Q70CQ4 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC20.67■□□□□ 0.9
USP31Q70CQ4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC20.67■□□□□ 0.9
USP31Q70CQ4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC20.67■□□□□ 0.9
USP31Q70CQ4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC20.67■□□□□ 0.9
USP31Q70CQ4 AC020914.3-201ENST00000594712 304 ntBASIC20.67■□□□□ 0.9
USP31Q70CQ4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC20.67■□□□□ 0.9
USP31Q70CQ4 OR10B1P-201ENST00000601666 907 ntBASIC20.67■□□□□ 0.9
USP31Q70CQ4 AC106872.11-201ENST00000605838 421 ntBASIC20.67■□□□□ 0.9
USP31Q70CQ4 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC20.67■□□□□ 0.9
USP31Q70CQ4 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
USP31Q70CQ4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.67■□□□□ 0.9
USP31Q70CQ4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms