Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 FAM8A3P-201ENST00000427218 844 ntBASIC14.92□□□□□ -0.02
LPCAT4Q643R3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 AC005412.3-201ENST00000580309 715 ntBASIC14.92□□□□□ -0.02
LPCAT4Q643R3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.92□□□□□ -0.02
LPCAT4Q643R3 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 AC233702.3-201ENST00000578656 1387 ntBASIC14.91□□□□□ -0.02
LPCAT4Q643R3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 MIR4313-201ENST00000580760 101 ntBASIC14.91□□□□□ -0.02
LPCAT4Q643R3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 NTF6B-201ENST00000591913 560 ntBASIC14.91□□□□□ -0.02
LPCAT4Q643R3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 AC092135.3-201ENST00000624151 1846 ntBASIC14.91□□□□□ -0.02
LPCAT4Q643R3 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 AP001267.2-201ENST00000532619 2086 ntBASIC14.91□□□□□ -0.02
LPCAT4Q643R3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LPCAT4Q643R3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms