Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCN1P1Q5VSP4 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCN1P1Q5VSP4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LCN1P1Q5VSP4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LCN1P1Q5VSP4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCN1P1Q5VSP4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
LCN1P1Q5VSP4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
LCN1P1Q5VSP4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LCN1P1Q5VSP4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCN1P1Q5VSP4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LCN1P1Q5VSP4 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCN1P1Q5VSP4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.35□□□□□ -0.11
LCN1P1Q5VSP4 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LCN1P1Q5VSP4 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
LCN1P1Q5VSP4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 AC134407.2-201ENST00000625089 1978 ntBASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 WASH6P-202ENST00000359512 1437 ntBASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 RHOQP3-201ENST00000437982 621 ntBASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 AC140658.5-201ENST00000438532 169 ntBASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 HCG4B-203ENST00000450128 991 ntBASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 AC093909.1-201ENST00000504731 1122 ntBASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 AL691432.3-201ENST00000621860 400 ntBASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 AC148477.8-201ENST00000624298 468 ntBASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 ST20-AS1-201ENST00000560255 4223 ntBASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 AC105250.1-201ENST00000509378 2057 ntBASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LCN1P1Q5VSP4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LCN1P1Q5VSP4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LCN1P1Q5VSP4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LCN1P1Q5VSP4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.11
LCN1P1Q5VSP4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LCN1P1Q5VSP4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LCN1P1Q5VSP4 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LCN1P1Q5VSP4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
LCN1P1Q5VSP4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.33□□□□□ -0.11
LCN1P1Q5VSP4 AC090616.6-203ENST00000579186 1945 ntBASIC14.33□□□□□ -0.11
LCN1P1Q5VSP4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LCN1P1Q5VSP4 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LCN1P1Q5VSP4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.33□□□□□ -0.12
LCN1P1Q5VSP4 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCN1P1Q5VSP4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LCN1P1Q5VSP4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.33□□□□□ -0.12
LCN1P1Q5VSP4 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LCN1P1Q5VSP4 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCN1P1Q5VSP4 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCN1P1Q5VSP4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
LCN1P1Q5VSP4 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCN1P1Q5VSP4 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
LCN1P1Q5VSP4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCN1P1Q5VSP4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LCN1P1Q5VSP4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCN1P1Q5VSP4 AC004870.1-201ENST00000315132 882 ntBASIC14.33□□□□□ -0.12
LCN1P1Q5VSP4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.33□□□□□ -0.12
LCN1P1Q5VSP4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LCN1P1Q5VSP4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.33□□□□□ -0.12
LCN1P1Q5VSP4 AC009947.1-201ENST00000444350 727 ntBASIC14.33□□□□□ -0.12
LCN1P1Q5VSP4 UNC93B7-201ENST00000509439 705 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms