Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL16A1Q07092 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COL16A1Q07092 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL16A1Q07092 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL16A1Q07092 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
COL16A1Q07092 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL16A1Q07092 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COL16A1Q07092 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC20.58■□□□□ 0.88
COL16A1Q07092 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL16A1Q07092 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COL16A1Q07092 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL16A1Q07092 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC20.58■□□□□ 0.88
COL16A1Q07092 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC20.57■□□□□ 0.88
COL16A1Q07092 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
COL16A1Q07092 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL16A1Q07092 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
COL16A1Q07092 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL16A1Q07092 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC20.57■□□□□ 0.88
COL16A1Q07092 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC20.57■□□□□ 0.88
COL16A1Q07092 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20.57■□□□□ 0.88
COL16A1Q07092 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20.57■□□□□ 0.88
COL16A1Q07092 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
COL16A1Q07092 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL16A1Q07092 AC139713.2-201ENST00000641328 2723 ntBASIC20.57■□□□□ 0.88
COL16A1Q07092 AMT-239ENST00000636865 1914 ntTSL 5 BASIC20.57■□□□□ 0.88
COL16A1Q07092 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL16A1Q07092 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.57■□□□□ 0.88
COL16A1Q07092 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL16A1Q07092 FKBP4P6-201ENST00000457486 1332 ntBASIC20.57■□□□□ 0.88
COL16A1Q07092 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL16A1Q07092 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL16A1Q07092 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC20.56■□□□□ 0.88
COL16A1Q07092 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC20.56■□□□□ 0.88
COL16A1Q07092 AC004837.1-201ENST00000446267 564 ntBASIC20.56■□□□□ 0.88
COL16A1Q07092 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
COL16A1Q07092 MME-218ENST00000625667 363 ntTSL 5 BASIC20.56■□□□□ 0.88
COL16A1Q07092 AL645728.2-202ENST00000641679 227 ntBASIC20.56■□□□□ 0.88
COL16A1Q07092 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL16A1Q07092 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.56■□□□□ 0.88
COL16A1Q07092 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL16A1Q07092 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL16A1Q07092 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL16A1Q07092 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL16A1Q07092 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL16A1Q07092 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL16A1Q07092 AC068880.1-201ENST00000507289 2297 ntBASIC20.56■□□□□ 0.88
COL16A1Q07092 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.56■□□□□ 0.88
COL16A1Q07092 AC005052.1-201ENST00000625181 2492 ntBASIC20.56■□□□□ 0.88
COL16A1Q07092 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL16A1Q07092 ABR-203ENST00000536794 2213 ntTSL 2 BASIC20.56■□□□□ 0.88
COL16A1Q07092 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
COL16A1Q07092 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
COL16A1Q07092 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL16A1Q07092 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL16A1Q07092 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL16A1Q07092 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL16A1Q07092 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC20.56■□□□□ 0.88
COL16A1Q07092 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL16A1Q07092 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL16A1Q07092 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL16A1Q07092 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL16A1Q07092 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL16A1Q07092 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC20.56■□□□□ 0.88
COL16A1Q07092 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC20.56■□□□□ 0.88
COL16A1Q07092 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
COL16A1Q07092 CDC23-208ENST00000505120 455 ntTSL 3 BASIC20.56■□□□□ 0.88
COL16A1Q07092 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC20.56■□□□□ 0.88
COL16A1Q07092 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC20.56■□□□□ 0.88
COL16A1Q07092 AC087392.5-201ENST00000612517 489 ntBASIC20.56■□□□□ 0.88
COL16A1Q07092 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL16A1Q07092 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL16A1Q07092 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL16A1Q07092 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL16A1Q07092 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL16A1Q07092 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL16A1Q07092 NCR3-202ENST00000376071 541 ntTSL 5 BASIC20.55■□□□□ 0.88
COL16A1Q07092 AL357373.1-201ENST00000394974 322 ntBASIC20.55■□□□□ 0.88
COL16A1Q07092 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC20.55■□□□□ 0.88
COL16A1Q07092 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC20.55■□□□□ 0.88
COL16A1Q07092 AC026320.2-201ENST00000434379 478 ntBASIC20.55■□□□□ 0.88
COL16A1Q07092 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC20.55■□□□□ 0.88
COL16A1Q07092 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC20.55■□□□□ 0.88
COL16A1Q07092 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC20.55■□□□□ 0.88
COL16A1Q07092 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC20.55■□□□□ 0.88
COL16A1Q07092 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
COL16A1Q07092 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL16A1Q07092 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL16A1Q07092 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL16A1Q07092 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
COL16A1Q07092 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL16A1Q07092 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.55■□□□□ 0.88
COL16A1Q07092 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL16A1Q07092 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL16A1Q07092 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC20.54■□□□□ 0.88
COL16A1Q07092 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.54■□□□□ 0.88
COL16A1Q07092 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.54■□□□□ 0.88
COL16A1Q07092 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL16A1Q07092 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
COL16A1Q07092 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
COL16A1Q07092 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms