Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PRKCDQ05655 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PRKCDQ05655 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.59□□□□□ -0.07
PRKCDQ05655 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
PRKCDQ05655 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PRKCDQ05655 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PRKCDQ05655 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.59□□□□□ -0.07
PRKCDQ05655 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
PRKCDQ05655 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.59□□□□□ -0.07
PRKCDQ05655 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
PRKCDQ05655 IL9RP2-201ENST00000423948 1312 ntBASIC14.59□□□□□ -0.07
PRKCDQ05655 AKAP8P1-201ENST00000434743 1349 ntBASIC14.59□□□□□ -0.07
PRKCDQ05655 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.59□□□□□ -0.07
PRKCDQ05655 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PRKCDQ05655 AC105250.1-201ENST00000509378 2057 ntBASIC14.59□□□□□ -0.07
PRKCDQ05655 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.59□□□□□ -0.07
PRKCDQ05655 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
PRKCDQ05655 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PRKCDQ05655 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PRKCDQ05655 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.59□□□□□ -0.07
PRKCDQ05655 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PRKCDQ05655 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PRKCDQ05655 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.07
PRKCDQ05655 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PRKCDQ05655 AL691432.1-201ENST00000596308 1422 ntBASIC14.58□□□□□ -0.07
PRKCDQ05655 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
PRKCDQ05655 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PRKCDQ05655 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
PRKCDQ05655 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PRKCDQ05655 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
PRKCDQ05655 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PRKCDQ05655 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PRKCDQ05655 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PRKCDQ05655 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PRKCDQ05655 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PRKCDQ05655 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PRKCDQ05655 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PRKCDQ05655 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.58□□□□□ -0.08
PRKCDQ05655 FOXO1B-201ENST00000504678 1527 ntBASIC14.58□□□□□ -0.08
PRKCDQ05655 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PRKCDQ05655 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PRKCDQ05655 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
PRKCDQ05655 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.58□□□□□ -0.08
PRKCDQ05655 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.58□□□□□ -0.08
PRKCDQ05655 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.58□□□□□ -0.08
PRKCDQ05655 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.58□□□□□ -0.08
PRKCDQ05655 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.58□□□□□ -0.08
PRKCDQ05655 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.58□□□□□ -0.08
PRKCDQ05655 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PRKCDQ05655 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.58□□□□□ -0.08
PRKCDQ05655 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.58□□□□□ -0.08
PRKCDQ05655 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.58□□□□□ -0.08
PRKCDQ05655 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PRKCDQ05655 AC092865.6-201ENST00000642101 219 ntBASIC14.58□□□□□ -0.08
PRKCDQ05655 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PRKCDQ05655 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.58□□□□□ -0.08
PRKCDQ05655 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
PRKCDQ05655 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PRKCDQ05655 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
PRKCDQ05655 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PRKCDQ05655 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PRKCDQ05655 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PRKCDQ05655 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PRKCDQ05655 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PRKCDQ05655 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.58□□□□□ -0.08
PRKCDQ05655 AL137784.3-201ENST00000623858 2288 ntBASIC14.58□□□□□ -0.08
PRKCDQ05655 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.58□□□□□ -0.08
PRKCDQ05655 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PRKCDQ05655 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PRKCDQ05655 ZNF259P1-201ENST00000407656 1365 ntBASIC14.58□□□□□ -0.08
PRKCDQ05655 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.58□□□□□ -0.08
PRKCDQ05655 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PRKCDQ05655 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
PRKCDQ05655 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PRKCDQ05655 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
PRKCDQ05655 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PRKCDQ05655 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.58□□□□□ -0.08
PRKCDQ05655 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.58□□□□□ -0.08
PRKCDQ05655 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.58□□□□□ -0.08
PRKCDQ05655 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PRKCDQ05655 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PRKCDQ05655 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.57□□□□□ -0.08
PRKCDQ05655 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
PRKCDQ05655 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.57□□□□□ -0.08
PRKCDQ05655 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PRKCDQ05655 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.57□□□□□ -0.08
PRKCDQ05655 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PRKCDQ05655 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PRKCDQ05655 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PRKCDQ05655 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PRKCDQ05655 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PRKCDQ05655 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PRKCDQ05655 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.57□□□□□ -0.08
PRKCDQ05655 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PRKCDQ05655 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PRKCDQ05655 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.57□□□□□ -0.08
PRKCDQ05655 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PRKCDQ05655 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.57□□□□□ -0.08
PRKCDQ05655 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
PRKCDQ05655 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms