Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S1P61966 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.82■□□□□ 0.12
AP1S1P61966 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S1P61966 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.82■□□□□ 0.12
AP1S1P61966 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S1P61966 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S1P61966 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S1P61966 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S1P61966 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S1P61966 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
AP1S1P61966 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S1P61966 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S1P61966 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.82■□□□□ 0.12
AP1S1P61966 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.82■□□□□ 0.12
AP1S1P61966 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.82■□□□□ 0.12
AP1S1P61966 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.82■□□□□ 0.12
AP1S1P61966 CRB3P1-201ENST00000449338 276 ntBASIC15.82■□□□□ 0.12
AP1S1P61966 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S1P61966 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
AP1S1P61966 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.82■□□□□ 0.12
AP1S1P61966 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.82■□□□□ 0.12
AP1S1P61966 AC190387.1-201ENST00000551683 408 ntBASIC15.82■□□□□ 0.12
AP1S1P61966 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.82■□□□□ 0.12
AP1S1P61966 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.82■□□□□ 0.12
AP1S1P61966 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.82■□□□□ 0.12
AP1S1P61966 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
AP1S1P61966 AC093726.1-201ENST00000608064 963 ntBASIC15.82■□□□□ 0.12
AP1S1P61966 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.82■□□□□ 0.12
AP1S1P61966 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S1P61966 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
AP1S1P61966 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S1P61966 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S1P61966 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S1P61966 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
AP1S1P61966 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S1P61966 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S1P61966 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
AP1S1P61966 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
AP1S1P61966 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
AP1S1P61966 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S1P61966 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
AP1S1P61966 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
AP1S1P61966 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S1P61966 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S1P61966 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S1P61966 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S1P61966 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S1P61966 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
AP1S1P61966 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S1P61966 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S1P61966 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S1P61966 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S1P61966 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S1P61966 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.81■□□□□ 0.12
AP1S1P61966 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S1P61966 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S1P61966 RN7SL399P-201ENST00000471648 279 ntBASIC15.81■□□□□ 0.12
AP1S1P61966 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.81■□□□□ 0.12
AP1S1P61966 AC105250.1-201ENST00000509378 2057 ntBASIC15.81■□□□□ 0.12
AP1S1P61966 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S1P61966 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.81■□□□□ 0.12
AP1S1P61966 API5-211ENST00000534695 560 ntTSL 5 BASIC15.81■□□□□ 0.12
AP1S1P61966 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.81■□□□□ 0.12
AP1S1P61966 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.81■□□□□ 0.12
AP1S1P61966 AC140912.1-201ENST00000577171 1054 ntBASIC15.81■□□□□ 0.12
AP1S1P61966 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.81■□□□□ 0.12
AP1S1P61966 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.81■□□□□ 0.12
AP1S1P61966 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.81■□□□□ 0.12
AP1S1P61966 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.81■□□□□ 0.12
AP1S1P61966 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.81■□□□□ 0.12
AP1S1P61966 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.81■□□□□ 0.12
AP1S1P61966 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S1P61966 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.81■□□□□ 0.12
AP1S1P61966 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S1P61966 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S1P61966 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
AP1S1P61966 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S1P61966 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S1P61966 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
AP1S1P61966 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S1P61966 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S1P61966 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S1P61966 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
AP1S1P61966 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.8■□□□□ 0.12
AP1S1P61966 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S1P61966 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S1P61966 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
AP1S1P61966 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
AP1S1P61966 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S1P61966 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
AP1S1P61966 CLK3P2-201ENST00000427566 1453 ntBASIC15.8■□□□□ 0.12
AP1S1P61966 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S1P61966 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
AP1S1P61966 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
AP1S1P61966 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.8■□□□□ 0.12
AP1S1P61966 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.8■□□□□ 0.12
AP1S1P61966 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
AP1S1P61966 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.8■□□□□ 0.12
AP1S1P61966 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.8■□□□□ 0.12
AP1S1P61966 AC104596.2-201ENST00000512793 793 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms