Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDE1AP54750 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.66
PDE1AP54750 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.66
PDE1AP54750 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PDE1AP54750 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC19.2■□□□□ 0.66
PDE1AP54750 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PDE1AP54750 AC126365.1-201ENST00000578585 1514 ntBASIC19.2■□□□□ 0.66
PDE1AP54750 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE1AP54750 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PDE1AP54750 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC19.2■□□□□ 0.66
PDE1AP54750 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC19.2■□□□□ 0.66
PDE1AP54750 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE1AP54750 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PDE1AP54750 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE1AP54750 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.2■□□□□ 0.66
PDE1AP54750 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC19.2■□□□□ 0.66
PDE1AP54750 STRN-202ENST00000379213 2254 ntTSL 5 BASIC19.2■□□□□ 0.66
PDE1AP54750 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE1AP54750 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.2■□□□□ 0.66
PDE1AP54750 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.2■□□□□ 0.66
PDE1AP54750 AC015922.1-201ENST00000421102 1152 ntBASIC19.2■□□□□ 0.66
PDE1AP54750 AC241585.1-201ENST00000433527 519 ntBASIC19.2■□□□□ 0.66
PDE1AP54750 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PDE1AP54750 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.2■□□□□ 0.66
PDE1AP54750 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.2■□□□□ 0.66
PDE1AP54750 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PDE1AP54750 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.2■□□□□ 0.66
PDE1AP54750 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PDE1AP54750 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.2■□□□□ 0.66
PDE1AP54750 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
PDE1AP54750 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE1AP54750 AMT-224ENST00000635808 1610 ntTSL 5 BASIC19.2■□□□□ 0.66
PDE1AP54750 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC19.2■□□□□ 0.66
PDE1AP54750 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC19.2■□□□□ 0.66
PDE1AP54750 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PDE1AP54750 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE1AP54750 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PDE1AP54750 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PDE1AP54750 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE1AP54750 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE1AP54750 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE1AP54750 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE1AP54750 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE1AP54750 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE1AP54750 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PDE1AP54750 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.19■□□□□ 0.66
PDE1AP54750 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC19.19■□□□□ 0.66
PDE1AP54750 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE1AP54750 MFF-204ENST00000353339 2186 ntTSL 5 BASIC19.19■□□□□ 0.66
PDE1AP54750 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC19.19■□□□□ 0.66
PDE1AP54750 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC19.19■□□□□ 0.66
PDE1AP54750 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC19.19■□□□□ 0.66
PDE1AP54750 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDE1AP54750 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDE1AP54750 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.19■□□□□ 0.66
PDE1AP54750 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.19■□□□□ 0.66
PDE1AP54750 TOMM22P5-201ENST00000416399 439 ntBASIC19.19■□□□□ 0.66
PDE1AP54750 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.19■□□□□ 0.66
PDE1AP54750 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.19■□□□□ 0.66
PDE1AP54750 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.19■□□□□ 0.66
PDE1AP54750 AC106028.4-201ENST00000614509 607 ntBASIC19.19■□□□□ 0.66
PDE1AP54750 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDE1AP54750 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.19■□□□□ 0.66
PDE1AP54750 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE1AP54750 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PDE1AP54750 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE1AP54750 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDE1AP54750 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE1AP54750 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE1AP54750 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE1AP54750 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
PDE1AP54750 AC103702.1-201ENST00000548801 2630 ntBASIC19.19■□□□□ 0.66
PDE1AP54750 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.19■□□□□ 0.66
PDE1AP54750 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDE1AP54750 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE1AP54750 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDE1AP54750 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE1AP54750 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDE1AP54750 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE1AP54750 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.18■□□□□ 0.66
PDE1AP54750 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PDE1AP54750 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.18■□□□□ 0.66
PDE1AP54750 MST1L-201ENST00000442552 2185 ntBASIC19.18■□□□□ 0.66
PDE1AP54750 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PDE1AP54750 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC19.18■□□□□ 0.66
PDE1AP54750 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE1AP54750 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE1AP54750 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDE1AP54750 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.18■□□□□ 0.66
PDE1AP54750 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.18■□□□□ 0.66
PDE1AP54750 AC004890.2-204ENST00000481968 304 ntBASIC19.18■□□□□ 0.66
PDE1AP54750 IGHV3-42-201ENST00000520410 361 ntBASIC19.18■□□□□ 0.66
PDE1AP54750 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC19.18■□□□□ 0.66
PDE1AP54750 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.18■□□□□ 0.66
PDE1AP54750 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.18■□□□□ 0.66
PDE1AP54750 AC015910.1-201ENST00000579400 975 ntBASIC19.18■□□□□ 0.66
PDE1AP54750 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.18■□□□□ 0.66
PDE1AP54750 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.18■□□□□ 0.66
PDE1AP54750 AL390754.1-201ENST00000619088 582 ntBASIC19.18■□□□□ 0.66
PDE1AP54750 AC004461.2-201ENST00000629517 803 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms