Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CACNA2D1P54289 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
CACNA2D1P54289 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CACNA2D1P54289 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CACNA2D1P54289 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CACNA2D1P54289 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CACNA2D1P54289 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CACNA2D1P54289 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 DFFBP1-201ENST00000433250 979 ntBASIC16.72■□□□□ 0.27
CACNA2D1P54289 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CACNA2D1P54289 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 AL391069.4-201ENST00000609583 481 ntBASIC16.72■□□□□ 0.27
CACNA2D1P54289 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CACNA2D1P54289 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CACNA2D1P54289 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CACNA2D1P54289 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CACNA2D1P54289 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CACNA2D1P54289 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CACNA2D1P54289 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CACNA2D1P54289 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CACNA2D1P54289 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CACNA2D1P54289 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CACNA2D1P54289 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CACNA2D1P54289 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CACNA2D1P54289 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CACNA2D1P54289 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
CACNA2D1P54289 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CACNA2D1P54289 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CACNA2D1P54289 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CACNA2D1P54289 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CACNA2D1P54289 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CACNA2D1P54289 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
CACNA2D1P54289 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.71■□□□□ 0.27
CACNA2D1P54289 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CACNA2D1P54289 AC098850.1-201ENST00000419919 790 ntBASIC16.71■□□□□ 0.27
CACNA2D1P54289 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.71■□□□□ 0.27
CACNA2D1P54289 AL353779.1-201ENST00000434793 351 ntBASIC16.71■□□□□ 0.27
CACNA2D1P54289 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.71■□□□□ 0.27
CACNA2D1P54289 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CACNA2D1P54289 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.71■□□□□ 0.27
CACNA2D1P54289 AC093004.1-201ENST00000508850 424 ntBASIC16.71■□□□□ 0.27
CACNA2D1P54289 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CACNA2D1P54289 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.71■□□□□ 0.27
CACNA2D1P54289 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.71■□□□□ 0.27
CACNA2D1P54289 TP53TG3HP-202ENST00000569755 579 ntBASIC16.71■□□□□ 0.27
CACNA2D1P54289 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.71■□□□□ 0.27
CACNA2D1P54289 AC008494.3-201ENST00000606615 944 ntBASIC16.71■□□□□ 0.27
CACNA2D1P54289 MIR8072-201ENST00000614241 80 ntBASIC16.71■□□□□ 0.27
CACNA2D1P54289 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CACNA2D1P54289 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.71■□□□□ 0.27
CACNA2D1P54289 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CACNA2D1P54289 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CACNA2D1P54289 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.71■□□□□ 0.27
CACNA2D1P54289 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
CACNA2D1P54289 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CACNA2D1P54289 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CACNA2D1P54289 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.71■□□□□ 0.27
CACNA2D1P54289 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CACNA2D1P54289 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CACNA2D1P54289 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CACNA2D1P54289 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CACNA2D1P54289 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CACNA2D1P54289 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.71■□□□□ 0.27
CACNA2D1P54289 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CACNA2D1P54289 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
CACNA2D1P54289 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
CACNA2D1P54289 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
CACNA2D1P54289 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
CACNA2D1P54289 AC099063.4-201ENST00000641099 1602 ntBASIC16.7■□□□□ 0.26
CACNA2D1P54289 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.7■□□□□ 0.26
CACNA2D1P54289 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CACNA2D1P54289 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CACNA2D1P54289 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CACNA2D1P54289 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CACNA2D1P54289 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
CACNA2D1P54289 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CACNA2D1P54289 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms