Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.08□□□□□ -0.16
SRP9P49458 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
SRP9P49458 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.08□□□□□ -0.16
SRP9P49458 GPX1P2-201ENST00000429271 606 ntBASIC14.08□□□□□ -0.16
SRP9P49458 AL671277.1-201ENST00000429656 993 ntBASIC14.08□□□□□ -0.16
SRP9P49458 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 RN7SL589P-201ENST00000481268 310 ntBASIC14.08□□□□□ -0.16
SRP9P49458 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.08□□□□□ -0.16
SRP9P49458 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.08□□□□□ -0.16
SRP9P49458 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.08□□□□□ -0.16
SRP9P49458 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.08□□□□□ -0.16
SRP9P49458 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.08□□□□□ -0.16
SRP9P49458 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.08□□□□□ -0.16
SRP9P49458 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.08□□□□□ -0.16
SRP9P49458 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.08□□□□□ -0.16
SRP9P49458 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.08□□□□□ -0.16
SRP9P49458 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 AKAP8P1-201ENST00000434743 1349 ntBASIC14.08□□□□□ -0.16
SRP9P49458 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.08□□□□□ -0.16
SRP9P49458 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.08□□□□□ -0.16
SRP9P49458 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.08□□□□□ -0.16
SRP9P49458 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.08□□□□□ -0.16
SRP9P49458 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SRP9P49458 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SRP9P49458 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.08□□□□□ -0.16
SRP9P49458 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SRP9P49458 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.07□□□□□ -0.16
SRP9P49458 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRP9P49458 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SRP9P49458 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.07□□□□□ -0.16
SRP9P49458 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.07□□□□□ -0.16
SRP9P49458 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.07□□□□□ -0.16
SRP9P49458 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SRP9P49458 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRP9P49458 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.07□□□□□ -0.16
SRP9P49458 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.07□□□□□ -0.16
SRP9P49458 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SRP9P49458 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
SRP9P49458 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.07□□□□□ -0.16
SRP9P49458 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.07□□□□□ -0.16
SRP9P49458 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRP9P49458 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRP9P49458 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRP9P49458 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRP9P49458 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.07□□□□□ -0.16
SRP9P49458 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.07□□□□□ -0.16
SRP9P49458 CEND1P1-201ENST00000451006 455 ntBASIC14.07□□□□□ -0.16
SRP9P49458 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.07□□□□□ -0.16
SRP9P49458 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.07□□□□□ -0.16
SRP9P49458 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.07□□□□□ -0.16
SRP9P49458 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SRP9P49458 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.07□□□□□ -0.16
SRP9P49458 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.07□□□□□ -0.16
SRP9P49458 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
SRP9P49458 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SRP9P49458 AC092902.6-201ENST00000641783 218 ntBASIC14.07□□□□□ -0.16
SRP9P49458 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SRP9P49458 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRP9P49458 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.07□□□□□ -0.16
SRP9P49458 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRP9P49458 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
SRP9P49458 LINC01101-201ENST00000622953 1884 ntBASIC14.07□□□□□ -0.16
SRP9P49458 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRP9P49458 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SRP9P49458 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.07□□□□□ -0.16
SRP9P49458 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.07□□□□□ -0.16
SRP9P49458 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SRP9P49458 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SRP9P49458 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SRP9P49458 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SRP9P49458 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SRP9P49458 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SRP9P49458 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRP9P49458 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.07□□□□□ -0.16
SRP9P49458 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRP9P49458 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SRP9P49458 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms