Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.4□□□□□ -0.11
CENPAP49450 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CENPAP49450 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CENPAP49450 AC126177.1-201ENST00000547829 2218 ntBASIC14.39□□□□□ -0.11
CENPAP49450 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.39□□□□□ -0.11
CENPAP49450 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.39□□□□□ -0.11
CENPAP49450 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.39□□□□□ -0.11
CENPAP49450 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.39□□□□□ -0.11
CENPAP49450 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
CENPAP49450 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CENPAP49450 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CENPAP49450 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CENPAP49450 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CENPAP49450 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CENPAP49450 AC073347.1-201ENST00000421633 2643 ntBASIC14.39□□□□□ -0.11
CENPAP49450 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CENPAP49450 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CENPAP49450 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.39□□□□□ -0.11
CENPAP49450 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.39□□□□□ -0.11
CENPAP49450 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.39□□□□□ -0.11
CENPAP49450 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CENPAP49450 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CENPAP49450 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CENPAP49450 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.39□□□□□ -0.11
CENPAP49450 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.39□□□□□ -0.11
CENPAP49450 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CENPAP49450 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.39□□□□□ -0.11
CENPAP49450 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CENPAP49450 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.39□□□□□ -0.11
CENPAP49450 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.39□□□□□ -0.11
CENPAP49450 SLC25A1P1-201ENST00000528351 927 ntBASIC14.39□□□□□ -0.11
CENPAP49450 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.39□□□□□ -0.11
CENPAP49450 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.39□□□□□ -0.11
CENPAP49450 AC092865.6-201ENST00000642101 219 ntBASIC14.39□□□□□ -0.11
CENPAP49450 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.39□□□□□ -0.11
CENPAP49450 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CENPAP49450 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.39□□□□□ -0.11
CENPAP49450 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CENPAP49450 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CENPAP49450 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CENPAP49450 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.39□□□□□ -0.11
CENPAP49450 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.39□□□□□ -0.11
CENPAP49450 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.39□□□□□ -0.11
CENPAP49450 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CENPAP49450 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.39□□□□□ -0.11
CENPAP49450 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CENPAP49450 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CENPAP49450 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
CENPAP49450 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CENPAP49450 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CENPAP49450 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
CENPAP49450 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CENPAP49450 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.38□□□□□ -0.11
CENPAP49450 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.38□□□□□ -0.11
CENPAP49450 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
CENPAP49450 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
CENPAP49450 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.38□□□□□ -0.11
CENPAP49450 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.38□□□□□ -0.11
CENPAP49450 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CENPAP49450 AC092384.3-202ENST00000564646 2873 ntBASIC14.38□□□□□ -0.11
CENPAP49450 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
CENPAP49450 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CENPAP49450 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CENPAP49450 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CENPAP49450 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.38□□□□□ -0.11
CENPAP49450 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.38□□□□□ -0.11
CENPAP49450 AC023274.1-201ENST00000418278 595 ntBASIC14.38□□□□□ -0.11
CENPAP49450 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.38□□□□□ -0.11
CENPAP49450 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.38□□□□□ -0.11
CENPAP49450 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.38□□□□□ -0.11
CENPAP49450 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 AP002472.1-201ENST00000577490 586 ntBASIC14.38□□□□□ -0.11
CENPAP49450 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.38□□□□□ -0.11
CENPAP49450 AC024267.1-201ENST00000582320 895 ntBASIC14.38□□□□□ -0.11
CENPAP49450 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.38□□□□□ -0.11
CENPAP49450 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
CENPAP49450 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CENPAP49450 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.38□□□□□ -0.11
CENPAP49450 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CENPAP49450 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CENPAP49450 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CENPAP49450 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CENPAP49450 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms