Protein–RNA interactions for Protein: P47224

RABIF, Guanine nucleotide exchange factor MSS4, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABIFP47224 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RABIFP47224 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RABIFP47224 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RABIFP47224 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RABIFP47224 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.36■□□□□ 0.05
RABIFP47224 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
RABIFP47224 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RABIFP47224 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RABIFP47224 RPL7P3-201ENST00000441388 714 ntBASIC15.36■□□□□ 0.05
RABIFP47224 AC007551.1-201ENST00000457394 519 ntBASIC15.36■□□□□ 0.05
RABIFP47224 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.36■□□□□ 0.05
RABIFP47224 GAPDHP40-201ENST00000505218 1006 ntBASIC15.36■□□□□ 0.05
RABIFP47224 AP001582.1-201ENST00000525856 295 ntBASIC15.36■□□□□ 0.05
RABIFP47224 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.36■□□□□ 0.05
RABIFP47224 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.36■□□□□ 0.05
RABIFP47224 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.36■□□□□ 0.05
RABIFP47224 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.36■□□□□ 0.05
RABIFP47224 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.36■□□□□ 0.05
RABIFP47224 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.36■□□□□ 0.05
RABIFP47224 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.36■□□□□ 0.05
RABIFP47224 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.36■□□□□ 0.05
RABIFP47224 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RABIFP47224 MIR6799-201ENST00000620297 69 ntBASIC15.36■□□□□ 0.05
RABIFP47224 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.36■□□□□ 0.05
RABIFP47224 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RABIFP47224 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.36■□□□□ 0.05
RABIFP47224 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.36■□□□□ 0.05
RABIFP47224 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RABIFP47224 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.36■□□□□ 0.05
RABIFP47224 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RABIFP47224 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
RABIFP47224 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.36■□□□□ 0.05
RABIFP47224 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RABIFP47224 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RABIFP47224 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RABIFP47224 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RABIFP47224 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RABIFP47224 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RABIFP47224 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RABIFP47224 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
RABIFP47224 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RABIFP47224 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RABIFP47224 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RABIFP47224 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RABIFP47224 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RABIFP47224 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RABIFP47224 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.35■□□□□ 0.05
RABIFP47224 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RABIFP47224 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.35■□□□□ 0.05
RABIFP47224 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RABIFP47224 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RABIFP47224 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RABIFP47224 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
RABIFP47224 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RABIFP47224 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RABIFP47224 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RABIFP47224 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RABIFP47224 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.35■□□□□ 0.05
RABIFP47224 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
RABIFP47224 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RABIFP47224 AC016694.1-201ENST00000434179 700 ntBASIC15.35■□□□□ 0.05
RABIFP47224 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RABIFP47224 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
RABIFP47224 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.35■□□□□ 0.05
RABIFP47224 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.35■□□□□ 0.05
RABIFP47224 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.35■□□□□ 0.05
RABIFP47224 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RABIFP47224 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RABIFP47224 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RABIFP47224 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RABIFP47224 AC018695.7-201ENST00000624587 2492 ntBASIC15.35■□□□□ 0.05
RABIFP47224 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RABIFP47224 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RABIFP47224 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RABIFP47224 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.34■□□□□ 0.05
RABIFP47224 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
RABIFP47224 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
RABIFP47224 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RABIFP47224 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
RABIFP47224 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
RABIFP47224 AC006449.5-201ENST00000610658 2098 ntBASIC15.34■□□□□ 0.05
RABIFP47224 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.34■□□□□ 0.05
RABIFP47224 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RABIFP47224 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.34■□□□□ 0.05
RABIFP47224 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RABIFP47224 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RABIFP47224 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RABIFP47224 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RABIFP47224 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.34■□□□□ 0.05
RABIFP47224 BNIP3P42-201ENST00000454982 569 ntBASIC15.34■□□□□ 0.05
RABIFP47224 FO681548.1-201ENST00000455617 1132 ntBASIC15.34■□□□□ 0.05
RABIFP47224 FTH1P14-201ENST00000482930 551 ntBASIC15.34■□□□□ 0.05
RABIFP47224 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.34■□□□□ 0.05
RABIFP47224 KRT18P25-201ENST00000508931 1278 ntBASIC15.34■□□□□ 0.05
RABIFP47224 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.34■□□□□ 0.05
RABIFP47224 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.34■□□□□ 0.05
RABIFP47224 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.34■□□□□ 0.05
RABIFP47224 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RABIFP47224 AP000812.2-201ENST00000538934 718 ntBASIC15.34■□□□□ 0.05
RABIFP47224 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms