Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MTHFRP42898 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MTHFRP42898 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.46■□□□□ 0.23
MTHFRP42898 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MTHFRP42898 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.46■□□□□ 0.23
MTHFRP42898 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
MTHFRP42898 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.46■□□□□ 0.22
MTHFRP42898 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
MTHFRP42898 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
MTHFRP42898 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
MTHFRP42898 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFRP42898 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.45■□□□□ 0.22
MTHFRP42898 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFRP42898 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFRP42898 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFRP42898 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFRP42898 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFRP42898 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFRP42898 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
MTHFRP42898 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFRP42898 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
MTHFRP42898 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFRP42898 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFRP42898 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFRP42898 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFRP42898 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
MTHFRP42898 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.45■□□□□ 0.22
MTHFRP42898 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.45■□□□□ 0.22
MTHFRP42898 CALR4P-201ENST00000431943 946 ntBASIC16.45■□□□□ 0.22
MTHFRP42898 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.45■□□□□ 0.22
MTHFRP42898 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.45■□□□□ 0.22
MTHFRP42898 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.45■□□□□ 0.22
MTHFRP42898 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.45■□□□□ 0.22
MTHFRP42898 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.45■□□□□ 0.22
MTHFRP42898 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.45■□□□□ 0.22
MTHFRP42898 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFRP42898 RHOQP1-201ENST00000555758 579 ntBASIC16.45■□□□□ 0.22
MTHFRP42898 GNRHR2-203ENST00000581100 1187 ntBASIC16.45■□□□□ 0.22
MTHFRP42898 AC093813.1-201ENST00000605066 256 ntBASIC16.45■□□□□ 0.22
MTHFRP42898 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.45■□□□□ 0.22
MTHFRP42898 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFRP42898 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
MTHFRP42898 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.45■□□□□ 0.22
MTHFRP42898 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.45■□□□□ 0.22
MTHFRP42898 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFRP42898 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
MTHFRP42898 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.45■□□□□ 0.22
MTHFRP42898 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.45■□□□□ 0.22
MTHFRP42898 AL162727.3-201ENST00000635661 2787 ntBASIC16.45■□□□□ 0.22
MTHFRP42898 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
MTHFRP42898 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
MTHFRP42898 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
MTHFRP42898 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFRP42898 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
MTHFRP42898 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFRP42898 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.45■□□□□ 0.22
MTHFRP42898 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFRP42898 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFRP42898 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MTHFRP42898 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MTHFRP42898 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MTHFRP42898 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
MTHFRP42898 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MTHFRP42898 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
MTHFRP42898 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.44■□□□□ 0.22
MTHFRP42898 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.44■□□□□ 0.22
MTHFRP42898 AC008741.2-201ENST00000612792 3115 ntBASIC16.44■□□□□ 0.22
MTHFRP42898 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
MTHFRP42898 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MTHFRP42898 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MTHFRP42898 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
MTHFRP42898 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MTHFRP42898 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MTHFRP42898 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MTHFRP42898 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MTHFRP42898 SLC25A24P2-201ENST00000415059 510 ntBASIC16.44■□□□□ 0.22
MTHFRP42898 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.44■□□□□ 0.22
MTHFRP42898 Z93015.1-201ENST00000451718 390 ntBASIC16.44■□□□□ 0.22
MTHFRP42898 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.44■□□□□ 0.22
MTHFRP42898 KRT18P43-201ENST00000469825 1281 ntBASIC16.44■□□□□ 0.22
MTHFRP42898 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MTHFRP42898 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MTHFRP42898 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MTHFRP42898 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
MTHFRP42898 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
MTHFRP42898 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.44■□□□□ 0.22
MTHFRP42898 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MTHFRP42898 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.44■□□□□ 0.22
MTHFRP42898 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.44■□□□□ 0.22
MTHFRP42898 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MTHFRP42898 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MTHFRP42898 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
MTHFRP42898 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
MTHFRP42898 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MTHFRP42898 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.44■□□□□ 0.22
MTHFRP42898 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MTHFRP42898 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.44■□□□□ 0.22
MTHFRP42898 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.44■□□□□ 0.22
MTHFRP42898 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MTHFRP42898 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms