Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRPHP41219 FLJ16779-201ENST00000612722 7638 ntBASIC17.79■□□□□ 0.44
PRPHP41219 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PRPHP41219 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRPHP41219 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRPHP41219 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRPHP41219 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRPHP41219 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRPHP41219 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRPHP41219 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRPHP41219 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.79■□□□□ 0.44
PRPHP41219 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRPHP41219 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.79■□□□□ 0.44
PRPHP41219 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
PRPHP41219 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.79■□□□□ 0.44
PRPHP41219 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRPHP41219 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRPHP41219 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.79■□□□□ 0.44
PRPHP41219 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.79■□□□□ 0.44
PRPHP41219 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.79■□□□□ 0.44
PRPHP41219 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.79■□□□□ 0.44
PRPHP41219 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.79■□□□□ 0.44
PRPHP41219 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.79■□□□□ 0.44
PRPHP41219 AC009477.1-201ENST00000452936 217 ntBASIC17.79■□□□□ 0.44
PRPHP41219 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.79■□□□□ 0.44
PRPHP41219 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.79■□□□□ 0.44
PRPHP41219 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.79■□□□□ 0.44
PRPHP41219 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PRPHP41219 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.79■□□□□ 0.44
PRPHP41219 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRPHP41219 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.79■□□□□ 0.44
PRPHP41219 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRPHP41219 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PRPHP41219 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRPHP41219 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.79■□□□□ 0.44
PRPHP41219 AC013268.4-201ENST00000637413 2228 ntBASIC17.79■□□□□ 0.44
PRPHP41219 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PRPHP41219 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PRPHP41219 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRPHP41219 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRPHP41219 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRPHP41219 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRPHP41219 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRPHP41219 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.78■□□□□ 0.44
PRPHP41219 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.78■□□□□ 0.44
PRPHP41219 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PRPHP41219 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.78■□□□□ 0.44
PRPHP41219 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
PRPHP41219 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PRPHP41219 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRPHP41219 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.78■□□□□ 0.44
PRPHP41219 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.78■□□□□ 0.44
PRPHP41219 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRPHP41219 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRPHP41219 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.78■□□□□ 0.44
PRPHP41219 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRPHP41219 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRPHP41219 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRPHP41219 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRPHP41219 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PRPHP41219 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRPHP41219 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRPHP41219 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PRPHP41219 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.78■□□□□ 0.44
PRPHP41219 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.78■□□□□ 0.44
PRPHP41219 TOMM22P5-201ENST00000416399 439 ntBASIC17.78■□□□□ 0.44
PRPHP41219 AC015922.1-201ENST00000421102 1152 ntBASIC17.78■□□□□ 0.44
PRPHP41219 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.78■□□□□ 0.44
PRPHP41219 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.78■□□□□ 0.44
PRPHP41219 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.78■□□□□ 0.44
PRPHP41219 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.78■□□□□ 0.44
PRPHP41219 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRPHP41219 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRPHP41219 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.78■□□□□ 0.44
PRPHP41219 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRPHP41219 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRPHP41219 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRPHP41219 AC112693.3-201ENST00000624819 1983 ntBASIC17.78■□□□□ 0.44
PRPHP41219 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRPHP41219 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRPHP41219 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRPHP41219 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRPHP41219 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PRPHP41219 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRPHP41219 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRPHP41219 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PRPHP41219 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PRPHP41219 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.78■□□□□ 0.44
PRPHP41219 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PRPHP41219 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PRPHP41219 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.77■□□□□ 0.44
PRPHP41219 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.77■□□□□ 0.44
PRPHP41219 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.77■□□□□ 0.44
PRPHP41219 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRPHP41219 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PRPHP41219 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRPHP41219 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PRPHP41219 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PRPHP41219 AC073347.1-201ENST00000421633 2643 ntBASIC17.77■□□□□ 0.44
PRPHP41219 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms