Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COPB2P35606 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.96■□□□□ 0.47
COPB2P35606 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COPB2P35606 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COPB2P35606 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
COPB2P35606 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COPB2P35606 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
COPB2P35606 FAM86MP-201ENST00000340703 885 ntBASIC17.96■□□□□ 0.47
COPB2P35606 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
COPB2P35606 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COPB2P35606 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.96■□□□□ 0.47
COPB2P35606 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.96■□□□□ 0.47
COPB2P35606 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.96■□□□□ 0.47
COPB2P35606 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.96■□□□□ 0.47
COPB2P35606 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.96■□□□□ 0.47
COPB2P35606 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.96■□□□□ 0.47
COPB2P35606 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.96■□□□□ 0.47
COPB2P35606 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.96■□□□□ 0.47
COPB2P35606 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.96■□□□□ 0.47
COPB2P35606 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COPB2P35606 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
COPB2P35606 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
COPB2P35606 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COPB2P35606 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.96■□□□□ 0.47
COPB2P35606 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COPB2P35606 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COPB2P35606 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COPB2P35606 CROCCP1-201ENST00000426910 5675 ntBASIC17.96■□□□□ 0.47
COPB2P35606 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COPB2P35606 DRD5P1-201ENST00000456605 1438 ntBASIC17.96■□□□□ 0.47
COPB2P35606 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COPB2P35606 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
COPB2P35606 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.96■□□□□ 0.47
COPB2P35606 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
COPB2P35606 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.96■□□□□ 0.46
COPB2P35606 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.95■□□□□ 0.46
COPB2P35606 AC006449.5-201ENST00000610658 2098 ntBASIC17.95■□□□□ 0.46
COPB2P35606 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COPB2P35606 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.95■□□□□ 0.46
COPB2P35606 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.95■□□□□ 0.46
COPB2P35606 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COPB2P35606 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COPB2P35606 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COPB2P35606 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COPB2P35606 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COPB2P35606 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.95■□□□□ 0.46
COPB2P35606 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.95■□□□□ 0.46
COPB2P35606 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.95■□□□□ 0.46
COPB2P35606 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
COPB2P35606 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COPB2P35606 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.95■□□□□ 0.46
COPB2P35606 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COPB2P35606 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
COPB2P35606 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.95■□□□□ 0.46
COPB2P35606 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.95■□□□□ 0.46
COPB2P35606 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.95■□□□□ 0.46
COPB2P35606 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.95■□□□□ 0.46
COPB2P35606 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COPB2P35606 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COPB2P35606 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COPB2P35606 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
COPB2P35606 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COPB2P35606 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.95■□□□□ 0.46
COPB2P35606 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COPB2P35606 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COPB2P35606 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COPB2P35606 AC132872.4-202ENST00000622924 2756 ntBASIC17.95■□□□□ 0.46
COPB2P35606 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COPB2P35606 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COPB2P35606 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.95■□□□□ 0.46
COPB2P35606 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
COPB2P35606 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COPB2P35606 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COPB2P35606 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
COPB2P35606 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COPB2P35606 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
COPB2P35606 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.94■□□□□ 0.46
COPB2P35606 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.94■□□□□ 0.46
COPB2P35606 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
COPB2P35606 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COPB2P35606 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COPB2P35606 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COPB2P35606 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COPB2P35606 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COPB2P35606 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COPB2P35606 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.94■□□□□ 0.46
COPB2P35606 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COPB2P35606 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COPB2P35606 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COPB2P35606 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.94■□□□□ 0.46
COPB2P35606 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
COPB2P35606 C2orf27AP3-201ENST00000434123 579 ntBASIC17.94■□□□□ 0.46
COPB2P35606 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.94■□□□□ 0.46
COPB2P35606 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COPB2P35606 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COPB2P35606 FTH1P14-201ENST00000482930 551 ntBASIC17.94■□□□□ 0.46
COPB2P35606 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.94■□□□□ 0.46
COPB2P35606 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.94■□□□□ 0.46
COPB2P35606 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
COPB2P35606 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms