Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPS1P31327 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21.75■■□□□ 1.07
CPS1P31327 NSD1-211ENST00000511258 809 ntTSL 3 BASIC21.75■■□□□ 1.07
CPS1P31327 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPS1P31327 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC21.75■■□□□ 1.07
CPS1P31327 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC21.75■■□□□ 1.07
CPS1P31327 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC21.75■■□□□ 1.07
CPS1P31327 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC21.75■■□□□ 1.07
CPS1P31327 OR10B1P-201ENST00000601666 907 ntBASIC21.75■■□□□ 1.07
CPS1P31327 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC21.75■■□□□ 1.07
CPS1P31327 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC21.75■■□□□ 1.07
CPS1P31327 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC21.75■■□□□ 1.07
CPS1P31327 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPS1P31327 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPS1P31327 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CPS1P31327 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPS1P31327 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPS1P31327 AC022188.1-201ENST00000620960 1664 ntBASIC21.74■■□□□ 1.07
CPS1P31327 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC21.74■■□□□ 1.07
CPS1P31327 AC007787.1-201ENST00000588095 1583 ntBASIC21.74■■□□□ 1.07
CPS1P31327 MVK-214ENST00000629016 1591 ntTSL 5 BASIC21.74■■□□□ 1.07
CPS1P31327 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPS1P31327 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CPS1P31327 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPS1P31327 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPS1P31327 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPS1P31327 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPS1P31327 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPS1P31327 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPS1P31327 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPS1P31327 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPS1P31327 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CPS1P31327 RNMTL1P1-201ENST00000454103 560 ntBASIC21.74■■□□□ 1.07
CPS1P31327 RBM8B-201ENST00000555532 525 ntBASIC21.74■■□□□ 1.07
CPS1P31327 AL031713.1-201ENST00000564813 661 ntBASIC21.74■■□□□ 1.07
CPS1P31327 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC21.74■■□□□ 1.07
CPS1P31327 IRF3-215ENST00000596822 823 ntTSL 3 BASIC21.74■■□□□ 1.07
CPS1P31327 AC138894.2-201ENST00000602838 371 ntBASIC21.74■■□□□ 1.07
CPS1P31327 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC21.74■■□□□ 1.07
CPS1P31327 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
CPS1P31327 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPS1P31327 AGGF1P2-201ENST00000426656 2106 ntBASIC21.74■■□□□ 1.07
CPS1P31327 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPS1P31327 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPS1P31327 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
CPS1P31327 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CPS1P31327 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPS1P31327 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPS1P31327 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPS1P31327 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CPS1P31327 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC21.73■■□□□ 1.07
CPS1P31327 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPS1P31327 AC074138.1-201ENST00000611182 1303 ntBASIC21.73■■□□□ 1.07
CPS1P31327 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.73■■□□□ 1.07
CPS1P31327 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CPS1P31327 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC21.73■■□□□ 1.07
CPS1P31327 AL136309.1-201ENST00000403917 691 ntBASIC21.73■■□□□ 1.07
CPS1P31327 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC21.73■■□□□ 1.07
CPS1P31327 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC21.73■■□□□ 1.07
CPS1P31327 AC106820.3-201ENST00000561653 397 ntBASIC21.73■■□□□ 1.07
CPS1P31327 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC21.73■■□□□ 1.07
CPS1P31327 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CPS1P31327 RNF146-211ENST00000609447 607 ntTSL 4 BASIC21.73■■□□□ 1.07
CPS1P31327 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CPS1P31327 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC21.73■■□□□ 1.07
CPS1P31327 AC004923.1-202ENST00000642106 209 ntBASIC21.73■■□□□ 1.07
CPS1P31327 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPS1P31327 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CPS1P31327 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPS1P31327 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC21.73■■□□□ 1.07
CPS1P31327 AC011676.5-201ENST00000624864 2660 ntBASIC21.73■■□□□ 1.07
CPS1P31327 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPS1P31327 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPS1P31327 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CPS1P31327 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPS1P31327 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPS1P31327 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.72■■□□□ 1.07
CPS1P31327 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CPS1P31327 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPS1P31327 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPS1P31327 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC21.72■■□□□ 1.07
CPS1P31327 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21.72■■□□□ 1.07
CPS1P31327 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPS1P31327 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC21.72■■□□□ 1.07
CPS1P31327 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPS1P31327 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPS1P31327 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CPS1P31327 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC21.72■■□□□ 1.07
CPS1P31327 AP002803.1-201ENST00000528836 498 ntBASIC21.72■■□□□ 1.07
CPS1P31327 RN7SL596P-201ENST00000582123 288 ntBASIC21.72■■□□□ 1.07
CPS1P31327 MIR6842-201ENST00000612539 65 ntBASIC21.72■■□□□ 1.07
CPS1P31327 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC21.72■■□□□ 1.07
CPS1P31327 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC21.72■■□□□ 1.07
CPS1P31327 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPS1P31327 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CPS1P31327 FZD10-202ENST00000539839 3282 ntBASIC21.72■■□□□ 1.07
CPS1P31327 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPS1P31327 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC21.72■■□□□ 1.07
CPS1P31327 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CPS1P31327 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms