Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN3P26045 Z97205.2-201ENST00000564697 1639 ntBASIC16.08■□□□□ 0.16
PTPN3P26045 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PTPN3P26045 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN3P26045 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PTPN3P26045 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PTPN3P26045 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN3P26045 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN3P26045 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PTPN3P26045 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN3P26045 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN3P26045 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN3P26045 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN3P26045 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN3P26045 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN3P26045 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN3P26045 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PTPN3P26045 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN3P26045 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN3P26045 AC092580.3-201ENST00000430932 139 ntBASIC16.07■□□□□ 0.16
PTPN3P26045 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN3P26045 METTL21AP1-201ENST00000438852 635 ntBASIC16.07■□□□□ 0.16
PTPN3P26045 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN3P26045 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.07■□□□□ 0.16
PTPN3P26045 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.07■□□□□ 0.16
PTPN3P26045 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.07■□□□□ 0.16
PTPN3P26045 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN3P26045 KRT18P28-201ENST00000453838 1332 ntBASIC16.07■□□□□ 0.16
PTPN3P26045 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN3P26045 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN3P26045 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.07■□□□□ 0.16
PTPN3P26045 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.07■□□□□ 0.16
PTPN3P26045 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN3P26045 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN3P26045 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.07■□□□□ 0.16
PTPN3P26045 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.07■□□□□ 0.16
PTPN3P26045 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN3P26045 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN3P26045 AC006486.2-201ENST00000624246 2199 ntBASIC16.07■□□□□ 0.16
PTPN3P26045 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN3P26045 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN3P26045 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN3P26045 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN3P26045 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
PTPN3P26045 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PTPN3P26045 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN3P26045 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN3P26045 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN3P26045 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN3P26045 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
PTPN3P26045 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.06■□□□□ 0.16
PTPN3P26045 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.06■□□□□ 0.16
PTPN3P26045 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
PTPN3P26045 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.06■□□□□ 0.16
PTPN3P26045 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.06■□□□□ 0.16
PTPN3P26045 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.06■□□□□ 0.16
PTPN3P26045 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.06■□□□□ 0.16
PTPN3P26045 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.06■□□□□ 0.16
PTPN3P26045 FAM86GP-201ENST00000448322 971 ntBASIC16.06■□□□□ 0.16
PTPN3P26045 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.06■□□□□ 0.16
PTPN3P26045 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.06■□□□□ 0.16
PTPN3P26045 AC067863.1-201ENST00000494933 530 ntBASIC16.06■□□□□ 0.16
PTPN3P26045 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.06■□□□□ 0.16
PTPN3P26045 AC010336.2-201ENST00000564226 506 ntBASIC16.06■□□□□ 0.16
PTPN3P26045 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.06■□□□□ 0.16
PTPN3P26045 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.06■□□□□ 0.16
PTPN3P26045 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.06■□□□□ 0.16
PTPN3P26045 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.06■□□□□ 0.16
PTPN3P26045 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.06■□□□□ 0.16
PTPN3P26045 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.06■□□□□ 0.16
PTPN3P26045 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 DBET-201ENST00000630918 3363 ntBASIC16.06■□□□□ 0.16
PTPN3P26045 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.06■□□□□ 0.16
PTPN3P26045 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PTPN3P26045 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.06■□□□□ 0.16
PTPN3P26045 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms