Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCNA2P20248 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.98□□□□□ -0.01
CCNA2P20248 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.98□□□□□ -0.01
CCNA2P20248 PDPK2P-202ENST00000562415 1191 ntBASIC14.98□□□□□ -0.01
CCNA2P20248 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.98□□□□□ -0.01
CCNA2P20248 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCNA2P20248 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCNA2P20248 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCNA2P20248 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCNA2P20248 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCNA2P20248 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCNA2P20248 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCNA2P20248 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.98□□□□□ -0.01
CCNA2P20248 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CCNA2P20248 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCNA2P20248 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
CCNA2P20248 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCNA2P20248 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.98□□□□□ -0.01
CCNA2P20248 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CCNA2P20248 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.98□□□□□ -0.01
CCNA2P20248 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCNA2P20248 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCNA2P20248 AC005622.1-201ENST00000636801 1703 ntBASIC14.97□□□□□ -0.01
CCNA2P20248 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.97□□□□□ -0.01
CCNA2P20248 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCNA2P20248 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
CCNA2P20248 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.97□□□□□ -0.01
CCNA2P20248 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCNA2P20248 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CCNA2P20248 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCNA2P20248 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.97□□□□□ -0.01
CCNA2P20248 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCNA2P20248 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CCNA2P20248 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCNA2P20248 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCNA2P20248 AP003680.1-201ENST00000598970 3660 ntBASIC14.97□□□□□ -0.01
CCNA2P20248 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCNA2P20248 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCNA2P20248 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCNA2P20248 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCNA2P20248 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CCNA2P20248 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCNA2P20248 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCNA2P20248 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.97□□□□□ -0.01
CCNA2P20248 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCNA2P20248 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.97□□□□□ -0.01
CCNA2P20248 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.97□□□□□ -0.01
CCNA2P20248 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.97□□□□□ -0.01
CCNA2P20248 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.97□□□□□ -0.01
CCNA2P20248 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.97□□□□□ -0.01
CCNA2P20248 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.97□□□□□ -0.01
CCNA2P20248 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.97□□□□□ -0.01
CCNA2P20248 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.97□□□□□ -0.01
CCNA2P20248 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.97□□□□□ -0.01
CCNA2P20248 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
CCNA2P20248 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCNA2P20248 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.97□□□□□ -0.01
CCNA2P20248 AL137784.3-201ENST00000623858 2288 ntBASIC14.97□□□□□ -0.01
CCNA2P20248 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CCNA2P20248 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CCNA2P20248 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.97□□□□□ -0.01
CCNA2P20248 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCNA2P20248 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.97□□□□□ -0.01
CCNA2P20248 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCNA2P20248 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCNA2P20248 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCNA2P20248 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CCNA2P20248 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCNA2P20248 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.96□□□□□ -0.01
CCNA2P20248 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCNA2P20248 LINC00552-201ENST00000625151 2579 ntBASIC14.96□□□□□ -0.01
CCNA2P20248 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCNA2P20248 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCNA2P20248 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCNA2P20248 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCNA2P20248 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCNA2P20248 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CCNA2P20248 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCNA2P20248 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCNA2P20248 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCNA2P20248 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
CCNA2P20248 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCNA2P20248 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.96□□□□□ -0.01
CCNA2P20248 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.96□□□□□ -0.01
CCNA2P20248 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.96□□□□□ -0.01
CCNA2P20248 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCNA2P20248 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCNA2P20248 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CCNA2P20248 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.96□□□□□ -0.01
CCNA2P20248 AC005840.4-201ENST00000541242 2494 ntBASIC14.96□□□□□ -0.01
CCNA2P20248 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CCNA2P20248 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.96□□□□□ -0.01
CCNA2P20248 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCNA2P20248 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.96□□□□□ -0.01
CCNA2P20248 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CCNA2P20248 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CCNA2P20248 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CCNA2P20248 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCNA2P20248 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCNA2P20248 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms