Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.23■□□□□ 0.51
ATP2B1P20020 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2B1P20020 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
ATP2B1P20020 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2B1P20020 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B1P20020 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B1P20020 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B1P20020 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B1P20020 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B1P20020 AC136621.1-201ENST00000624017 2304 ntBASIC18.22■□□□□ 0.51
ATP2B1P20020 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.22■□□□□ 0.51
ATP2B1P20020 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B1P20020 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.22■□□□□ 0.51
ATP2B1P20020 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B1P20020 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B1P20020 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B1P20020 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.22■□□□□ 0.51
ATP2B1P20020 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B1P20020 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B1P20020 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.22■□□□□ 0.51
ATP2B1P20020 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP2B1P20020 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B1P20020 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP2B1P20020 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP2B1P20020 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.22■□□□□ 0.51
ATP2B1P20020 AL133215.2-201ENST00000609242 977 ntBASIC18.22■□□□□ 0.51
ATP2B1P20020 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP2B1P20020 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B1P20020 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ATP2B1P20020 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B1P20020 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B1P20020 TCAF2P1-201ENST00000291129 2421 ntBASIC18.22■□□□□ 0.51
ATP2B1P20020 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP2B1P20020 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B1P20020 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B1P20020 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B1P20020 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP2B1P20020 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B1P20020 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B1P20020 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP2B1P20020 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B1P20020 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B1P20020 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B1P20020 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B1P20020 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B1P20020 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ATP2B1P20020 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B1P20020 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP2B1P20020 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B1P20020 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B1P20020 AZGP1P1-201ENST00000411909 902 ntBASIC18.21■□□□□ 0.51
ATP2B1P20020 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP2B1P20020 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.21■□□□□ 0.51
ATP2B1P20020 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ATP2B1P20020 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP2B1P20020 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
ATP2B1P20020 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.21■□□□□ 0.51
ATP2B1P20020 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP2B1P20020 MIR4313-201ENST00000580760 101 ntBASIC18.21■□□□□ 0.51
ATP2B1P20020 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B1P20020 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.21■□□□□ 0.51
ATP2B1P20020 AL450472.2-201ENST00000603663 1156 ntBASIC18.21■□□□□ 0.51
ATP2B1P20020 AL589739.1-201ENST00000607720 493 ntBASIC18.21■□□□□ 0.51
ATP2B1P20020 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B1P20020 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP2B1P20020 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B1P20020 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP2B1P20020 MIR600HG-201ENST00000449175 5984 ntBASIC18.21■□□□□ 0.51
ATP2B1P20020 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B1P20020 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B1P20020 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ATP2B1P20020 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B1P20020 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B1P20020 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B1P20020 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP2B1P20020 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B1P20020 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B1P20020 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP2B1P20020 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP2B1P20020 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B1P20020 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
ATP2B1P20020 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
ATP2B1P20020 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
ATP2B1P20020 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
ATP2B1P20020 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.21■□□□□ 0.5
ATP2B1P20020 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ATP2B1P20020 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B1P20020 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B1P20020 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B1P20020 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B1P20020 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B1P20020 AC009090.5-201ENST00000624886 2285 ntBASIC18.2■□□□□ 0.5
ATP2B1P20020 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.2■□□□□ 0.5
ATP2B1P20020 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC18.2■□□□□ 0.5
ATP2B1P20020 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ATP2B1P20020 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.2■□□□□ 0.5
ATP2B1P20020 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.2■□□□□ 0.5
ATP2B1P20020 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.2■□□□□ 0.5
ATP2B1P20020 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.2■□□□□ 0.5
ATP2B1P20020 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms