Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.66■□□□□ 0.26
PTPN1P18031 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN1P18031 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
PTPN1P18031 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN1P18031 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN1P18031 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN1P18031 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN1P18031 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN1P18031 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN1P18031 AC103702.1-201ENST00000548801 2630 ntBASIC16.66■□□□□ 0.26
PTPN1P18031 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN1P18031 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
PTPN1P18031 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN1P18031 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
PTPN1P18031 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
PTPN1P18031 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN1P18031 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN1P18031 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.65■□□□□ 0.26
PTPN1P18031 KRT18P43-201ENST00000469825 1281 ntBASIC16.65■□□□□ 0.26
PTPN1P18031 FAM86LP-201ENST00000478302 853 ntBASIC16.65■□□□□ 0.26
PTPN1P18031 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PTPN1P18031 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 AC005225.4-201ENST00000557330 545 ntBASIC16.65■□□□□ 0.26
PTPN1P18031 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.65■□□□□ 0.26
PTPN1P18031 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 CTBP2P3-201ENST00000585629 1255 ntBASIC16.65■□□□□ 0.26
PTPN1P18031 TMEM261P1-201ENST00000604899 340 ntBASIC16.65■□□□□ 0.26
PTPN1P18031 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.65■□□□□ 0.26
PTPN1P18031 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PTPN1P18031 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.65■□□□□ 0.26
PTPN1P18031 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.65■□□□□ 0.26
PTPN1P18031 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.65■□□□□ 0.26
PTPN1P18031 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
PTPN1P18031 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
PTPN1P18031 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.65■□□□□ 0.26
PTPN1P18031 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PTPN1P18031 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
PTPN1P18031 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN1P18031 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.26
PTPN1P18031 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PTPN1P18031 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.64■□□□□ 0.25
PTPN1P18031 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.64■□□□□ 0.25
PTPN1P18031 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PTPN1P18031 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN1P18031 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PTPN1P18031 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.64■□□□□ 0.25
PTPN1P18031 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
PTPN1P18031 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
PTPN1P18031 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN1P18031 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN1P18031 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN1P18031 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN1P18031 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN1P18031 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN1P18031 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.64■□□□□ 0.25
PTPN1P18031 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.64■□□□□ 0.25
PTPN1P18031 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.64■□□□□ 0.25
PTPN1P18031 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN1P18031 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN1P18031 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN1P18031 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.64■□□□□ 0.25
PTPN1P18031 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.64■□□□□ 0.25
PTPN1P18031 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN1P18031 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN1P18031 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.64■□□□□ 0.25
PTPN1P18031 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN1P18031 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN1P18031 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.64■□□□□ 0.25
PTPN1P18031 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PTPN1P18031 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN1P18031 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN1P18031 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN1P18031 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN1P18031 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN1P18031 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN1P18031 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms