Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PDGFRAP16234 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.55■□□□□ 0.24
PDGFRAP16234 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.55■□□□□ 0.24
PDGFRAP16234 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.55■□□□□ 0.24
PDGFRAP16234 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.55■□□□□ 0.24
PDGFRAP16234 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.55■□□□□ 0.24
PDGFRAP16234 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.55■□□□□ 0.24
PDGFRAP16234 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.55■□□□□ 0.24
PDGFRAP16234 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFRAP16234 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.55■□□□□ 0.24
PDGFRAP16234 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.55■□□□□ 0.24
PDGFRAP16234 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFRAP16234 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PDGFRAP16234 AL512361.1-201ENST00000554200 418 ntBASIC16.55■□□□□ 0.24
PDGFRAP16234 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.55■□□□□ 0.24
PDGFRAP16234 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.55■□□□□ 0.24
PDGFRAP16234 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.55■□□□□ 0.24
PDGFRAP16234 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.55■□□□□ 0.24
PDGFRAP16234 AC092364.2-202ENST00000597012 1073 ntBASIC16.55■□□□□ 0.24
PDGFRAP16234 AJ011932.1-201ENST00000621707 465 ntBASIC16.55■□□□□ 0.24
PDGFRAP16234 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
PDGFRAP16234 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFRAP16234 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFRAP16234 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
PDGFRAP16234 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFRAP16234 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFRAP16234 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PDGFRAP16234 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFRAP16234 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.55■□□□□ 0.24
PDGFRAP16234 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.55■□□□□ 0.24
PDGFRAP16234 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.55■□□□□ 0.24
PDGFRAP16234 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFRAP16234 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.55■□□□□ 0.24
PDGFRAP16234 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.55■□□□□ 0.24
PDGFRAP16234 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.55■□□□□ 0.24
PDGFRAP16234 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
PDGFRAP16234 AC092384.3-202ENST00000564646 2873 ntBASIC16.55■□□□□ 0.24
PDGFRAP16234 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFRAP16234 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.55■□□□□ 0.24
PDGFRAP16234 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFRAP16234 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.54■□□□□ 0.24
PDGFRAP16234 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFRAP16234 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFRAP16234 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PDGFRAP16234 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PDGFRAP16234 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFRAP16234 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFRAP16234 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.54■□□□□ 0.24
PDGFRAP16234 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFRAP16234 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.54■□□□□ 0.24
PDGFRAP16234 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.54■□□□□ 0.24
PDGFRAP16234 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFRAP16234 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFRAP16234 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.54■□□□□ 0.24
PDGFRAP16234 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFRAP16234 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFRAP16234 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFRAP16234 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFRAP16234 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.54■□□□□ 0.24
PDGFRAP16234 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFRAP16234 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFRAP16234 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.54■□□□□ 0.24
PDGFRAP16234 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PDGFRAP16234 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PDGFRAP16234 UGT1A2P-201ENST00000454886 866 ntBASIC16.54■□□□□ 0.24
PDGFRAP16234 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.54■□□□□ 0.24
PDGFRAP16234 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.54■□□□□ 0.24
PDGFRAP16234 RN7SL618P-201ENST00000477850 296 ntBASIC16.54■□□□□ 0.24
PDGFRAP16234 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.54■□□□□ 0.24
PDGFRAP16234 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.54■□□□□ 0.24
PDGFRAP16234 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.54■□□□□ 0.24
PDGFRAP16234 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.54■□□□□ 0.24
PDGFRAP16234 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFRAP16234 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.54■□□□□ 0.24
PDGFRAP16234 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.54■□□□□ 0.24
PDGFRAP16234 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.54■□□□□ 0.24
PDGFRAP16234 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.54■□□□□ 0.24
PDGFRAP16234 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFRAP16234 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFRAP16234 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFRAP16234 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFRAP16234 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFRAP16234 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
PDGFRAP16234 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.53■□□□□ 0.24
PDGFRAP16234 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.53■□□□□ 0.24
PDGFRAP16234 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.53■□□□□ 0.24
PDGFRAP16234 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.53■□□□□ 0.24
PDGFRAP16234 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.53■□□□□ 0.24
PDGFRAP16234 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.53■□□□□ 0.24
PDGFRAP16234 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms