Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 BOLA2P3-201ENST00000404566 256 ntBASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 BRI3BPP1-201ENST00000594224 787 ntBASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 REXO1L1P-202ENST00000608646 1974 ntBASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 AC234783.1-201ENST00000441761 496 ntBASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 AC008735.3-201ENST00000596646 500 ntBASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 AC010319.3-201ENST00000597028 470 ntBASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 AL512343.1-201ENST00000605837 169 ntBASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 MTHFR-217ENST00000641820 1569 ntBASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.85□□□□□ -0.03
RAB40ALP0C0E4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms