Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAPDHP04406 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.27□□□□□ -0.29
GAPDHP04406 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.27□□□□□ -0.29
GAPDHP04406 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.27□□□□□ -0.29
GAPDHP04406 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.27□□□□□ -0.29
GAPDHP04406 AL365330.1-201ENST00000607459 531 ntBASIC13.27□□□□□ -0.29
GAPDHP04406 AC008267.7-201ENST00000624570 1194 ntBASIC13.27□□□□□ -0.29
GAPDHP04406 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
GAPDHP04406 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GAPDHP04406 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAPDHP04406 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAPDHP04406 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
GAPDHP04406 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAPDHP04406 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
GAPDHP04406 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.27□□□□□ -0.29
GAPDHP04406 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAPDHP04406 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GAPDHP04406 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAPDHP04406 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
GAPDHP04406 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.27□□□□□ -0.29
GAPDHP04406 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GAPDHP04406 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GAPDHP04406 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GAPDHP04406 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.27□□□□□ -0.29
GAPDHP04406 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
GAPDHP04406 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAPDHP04406 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.27□□□□□ -0.29
GAPDHP04406 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAPDHP04406 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.27□□□□□ -0.29
GAPDHP04406 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAPDHP04406 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.27□□□□□ -0.29
GAPDHP04406 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.27□□□□□ -0.29
GAPDHP04406 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
GAPDHP04406 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
GAPDHP04406 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
GAPDHP04406 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
GAPDHP04406 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
GAPDHP04406 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
GAPDHP04406 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
GAPDHP04406 ELL2P1-201ENST00000413990 1906 ntBASIC13.26□□□□□ -0.29
GAPDHP04406 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.26□□□□□ -0.29
GAPDHP04406 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.26□□□□□ -0.29
GAPDHP04406 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.26□□□□□ -0.29
GAPDHP04406 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.26□□□□□ -0.29
GAPDHP04406 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.26□□□□□ -0.29
GAPDHP04406 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.26□□□□□ -0.29
GAPDHP04406 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.26□□□□□ -0.29
GAPDHP04406 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.26□□□□□ -0.29
GAPDHP04406 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.26□□□□□ -0.29
GAPDHP04406 AC027307.2-201ENST00000591252 911 ntBASIC13.26□□□□□ -0.29
GAPDHP04406 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
GAPDHP04406 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.26□□□□□ -0.29
GAPDHP04406 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
GAPDHP04406 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
GAPDHP04406 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GAPDHP04406 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GAPDHP04406 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAPDHP04406 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAPDHP04406 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAPDHP04406 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAPDHP04406 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GAPDHP04406 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAPDHP04406 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAPDHP04406 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.25□□□□□ -0.29
GAPDHP04406 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAPDHP04406 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.25□□□□□ -0.29
GAPDHP04406 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAPDHP04406 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
GAPDHP04406 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
GAPDHP04406 PCDHA3-202ENST00000532566 4594 ntBASIC13.25□□□□□ -0.29
GAPDHP04406 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
GAPDHP04406 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAPDHP04406 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.25□□□□□ -0.29
GAPDHP04406 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.25□□□□□ -0.29
GAPDHP04406 LINC00552-201ENST00000625151 2579 ntBASIC13.25□□□□□ -0.29
GAPDHP04406 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.25□□□□□ -0.29
GAPDHP04406 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms