Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AC073592.4-201ENST00000623827 446 ntBASIC14.15□□□□□ -0.14
APOA1P02647 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.15□□□□□ -0.14
APOA1P02647 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA1P02647 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.15□□□□□ -0.14
APOA1P02647 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA1P02647 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
APOA1P02647 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA1P02647 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.15□□□□□ -0.14
APOA1P02647 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA1P02647 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.15□□□□□ -0.14
APOA1P02647 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
APOA1P02647 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
APOA1P02647 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APOA1P02647 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.15□□□□□ -0.14
APOA1P02647 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
APOA1P02647 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
APOA1P02647 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.15□□□□□ -0.15
APOA1P02647 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
APOA1P02647 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.15
APOA1P02647 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
APOA1P02647 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA1P02647 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA1P02647 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.14□□□□□ -0.15
APOA1P02647 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA1P02647 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA1P02647 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
APOA1P02647 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
APOA1P02647 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.14□□□□□ -0.15
APOA1P02647 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
APOA1P02647 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.14□□□□□ -0.15
APOA1P02647 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA1P02647 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA1P02647 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOA1P02647 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
APOA1P02647 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
APOA1P02647 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
APOA1P02647 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOA1P02647 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOA1P02647 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA1P02647 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA1P02647 TSPY5P-201ENST00000426936 936 ntBASIC14.14□□□□□ -0.15
APOA1P02647 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.14□□□□□ -0.15
APOA1P02647 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.14□□□□□ -0.15
APOA1P02647 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.14□□□□□ -0.15
APOA1P02647 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOA1P02647 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.14□□□□□ -0.15
APOA1P02647 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.14□□□□□ -0.15
APOA1P02647 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
APOA1P02647 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA1P02647 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
APOA1P02647 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOA1P02647 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA1P02647 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
APOA1P02647 AC105250.1-201ENST00000509378 2057 ntBASIC14.14□□□□□ -0.15
APOA1P02647 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.14□□□□□ -0.15
APOA1P02647 AC140479.7-201ENST00000636301 2332 ntBASIC14.14□□□□□ -0.15
APOA1P02647 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA1P02647 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.14□□□□□ -0.15
APOA1P02647 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
APOA1P02647 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOA1P02647 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA1P02647 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA1P02647 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOA1P02647 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOA1P02647 CICP8-201ENST00000455800 2813 ntBASIC14.14□□□□□ -0.15
APOA1P02647 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOA1P02647 CICP17-201ENST00000418553 2377 ntBASIC14.14□□□□□ -0.15
APOA1P02647 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA1P02647 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA1P02647 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA1P02647 MBLAC2-202ENST00000514906 1936 ntBASIC14.13□□□□□ -0.15
APOA1P02647 AC136759.1-202ENST00000530858 2194 ntBASIC14.13□□□□□ -0.15
APOA1P02647 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA1P02647 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.13□□□□□ -0.15
APOA1P02647 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA1P02647 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOA1P02647 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.13□□□□□ -0.15
APOA1P02647 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.13□□□□□ -0.15
APOA1P02647 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOA1P02647 AC005622.1-201ENST00000636801 1703 ntBASIC14.13□□□□□ -0.15
APOA1P02647 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA1P02647 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
APOA1P02647 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA1P02647 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
APOA1P02647 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.13□□□□□ -0.15
APOA1P02647 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA1P02647 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA1P02647 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
APOA1P02647 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA1P02647 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOA1P02647 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOA1P02647 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.13□□□□□ -0.15
APOA1P02647 AL645929.1-201ENST00000420084 975 ntBASIC14.13□□□□□ -0.15
APOA1P02647 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
APOA1P02647 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.13□□□□□ -0.15
APOA1P02647 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.13□□□□□ -0.15
APOA1P02647 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
APOA1P02647 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.13□□□□□ -0.15
APOA1P02647 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
APOA1P02647 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms