Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 AC005332.1-201ENST00000577698 1310 ntBASIC11.93□□□□□ -0.5
HLA-DQA1P01909 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.93□□□□□ -0.5
HLA-DQA1P01909 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 AL020989.1-201ENST00000422979 469 ntBASIC11.93□□□□□ -0.5
HLA-DQA1P01909 RNF146-204ENST00000476956 884 ntTSL 2 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 KRT18P35-201ENST00000510488 1269 ntBASIC11.93□□□□□ -0.5
HLA-DQA1P01909 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 AL136038.3-201ENST00000561909 1096 ntBASIC11.93□□□□□ -0.5
HLA-DQA1P01909 CYP2A7P1-201ENST00000595391 815 ntBASIC11.93□□□□□ -0.5
HLA-DQA1P01909 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 AC092135.3-201ENST00000624151 1846 ntBASIC11.93□□□□□ -0.5
HLA-DQA1P01909 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.93□□□□□ -0.5
HLA-DQA1P01909 TCAF1P1-201ENST00000414990 2232 ntBASIC11.92□□□□□ -0.5
HLA-DQA1P01909 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 IER3-202ENST00000376377 1350 ntBASIC11.92□□□□□ -0.5
HLA-DQA1P01909 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 FXN-203ENST00000396366 922 ntTSL 2 BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 CTNS-203ENST00000399306 803 ntTSL 3 BASIC11.92□□□□□ -0.5
HLA-DQA1P01909 PCED1CP-201ENST00000419887 785 ntBASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms