Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.54□□□□□ -0.4
IFNA1P01562 WASH6P-202ENST00000359512 1437 ntBASIC12.54□□□□□ -0.4
IFNA1P01562 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 AL359881.3-201ENST00000602640 1721 ntBASIC12.54□□□□□ -0.4
IFNA1P01562 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 AC073957.3-201ENST00000609998 6758 ntBASIC12.54□□□□□ -0.4
IFNA1P01562 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 AP001282.1-201ENST00000531301 1499 ntBASIC12.54□□□□□ -0.4
IFNA1P01562 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.54□□□□□ -0.4
IFNA1P01562 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.54□□□□□ -0.4
IFNA1P01562 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
IFNA1P01562 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 MIR718-201ENST00000390190 70 ntBASIC12.54□□□□□ -0.4
IFNA1P01562 HCG4-201ENST00000418983 998 ntBASIC12.54□□□□□ -0.4
IFNA1P01562 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC12.54□□□□□ -0.4
IFNA1P01562 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
IFNA1P01562 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.54□□□□□ -0.4
IFNA1P01562 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.54□□□□□ -0.4
IFNA1P01562 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC12.54□□□□□ -0.4
IFNA1P01562 AC010331.1-201ENST00000611423 582 ntBASIC12.54□□□□□ -0.4
IFNA1P01562 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
IFNA1P01562 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.54□□□□□ -0.4
IFNA1P01562 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
IFNA1P01562 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 KRT17P2-201ENST00000300992 1314 ntBASIC12.54□□□□□ -0.4
IFNA1P01562 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.54□□□□□ -0.4
IFNA1P01562 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.54□□□□□ -0.4
IFNA1P01562 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
IFNA1P01562 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.54□□□□□ -0.4
IFNA1P01562 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.54□□□□□ -0.4
IFNA1P01562 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFNA1P01562 AC092053.3-201ENST00000641308 4975 ntBASIC12.53□□□□□ -0.4
IFNA1P01562 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
IFNA1P01562 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
IFNA1P01562 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
IFNA1P01562 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFNA1P01562 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFNA1P01562 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
IFNA1P01562 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFNA1P01562 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
IFNA1P01562 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.53□□□□□ -0.4
IFNA1P01562 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
IFNA1P01562 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFNA1P01562 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFNA1P01562 PRORSD1P-201ENST00000295112 541 ntBASIC12.53□□□□□ -0.4
IFNA1P01562 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFNA1P01562 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC12.53□□□□□ -0.4
IFNA1P01562 PMS2P1-201ENST00000431037 1228 ntBASIC12.53□□□□□ -0.4
IFNA1P01562 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.53□□□□□ -0.4
IFNA1P01562 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.53□□□□□ -0.4
IFNA1P01562 VENTXP5-201ENST00000523979 775 ntBASIC12.53□□□□□ -0.4
IFNA1P01562 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
IFNA1P01562 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC12.53□□□□□ -0.4
IFNA1P01562 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12.53□□□□□ -0.4
IFNA1P01562 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.53□□□□□ -0.4
IFNA1P01562 SNX21-213ENST00000614929 587 ntTSL 5 BASIC12.53□□□□□ -0.4
IFNA1P01562 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
IFNA1P01562 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.53□□□□□ -0.4
IFNA1P01562 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.53□□□□□ -0.4
IFNA1P01562 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFNA1P01562 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.53□□□□□ -0.4
IFNA1P01562 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
IFNA1P01562 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
IFNA1P01562 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
IFNA1P01562 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.53□□□□□ -0.4
IFNA1P01562 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFNA1P01562 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFNA1P01562 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFNA1P01562 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFNA1P01562 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
IFNA1P01562 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.53□□□□□ -0.4
IFNA1P01562 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFNA1P01562 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms