Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMPCBO75439 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PMPCBO75439 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.04■□□□□ 0.16
PMPCBO75439 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.04■□□□□ 0.16
PMPCBO75439 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMPCBO75439 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMPCBO75439 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PMPCBO75439 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMPCBO75439 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PMPCBO75439 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMPCBO75439 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMPCBO75439 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMPCBO75439 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMPCBO75439 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PMPCBO75439 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PMPCBO75439 AC136604.1-201ENST00000418535 575 ntBASIC16.04■□□□□ 0.16
PMPCBO75439 TREML5P-201ENST00000421694 576 ntBASIC16.04■□□□□ 0.16
PMPCBO75439 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.04■□□□□ 0.16
PMPCBO75439 SERBP1P3-201ENST00000459980 809 ntBASIC16.04■□□□□ 0.16
PMPCBO75439 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.04■□□□□ 0.16
PMPCBO75439 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PMPCBO75439 DUX4L27-201ENST00000554796 1261 ntBASIC16.04■□□□□ 0.16
PMPCBO75439 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.04■□□□□ 0.16
PMPCBO75439 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PMPCBO75439 TEX28P1-201ENST00000613479 1221 ntBASIC16.04■□□□□ 0.16
PMPCBO75439 TEX28P2-201ENST00000617764 1221 ntBASIC16.04■□□□□ 0.16
PMPCBO75439 MIR6069-201ENST00000620069 79 ntBASIC16.04■□□□□ 0.16
PMPCBO75439 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.04■□□□□ 0.16
PMPCBO75439 AL033527.5-202ENST00000641632 1098 ntBASIC16.04■□□□□ 0.16
PMPCBO75439 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMPCBO75439 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMPCBO75439 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PMPCBO75439 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PMPCBO75439 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PMPCBO75439 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.04■□□□□ 0.16
PMPCBO75439 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PMPCBO75439 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PMPCBO75439 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMPCBO75439 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMPCBO75439 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PMPCBO75439 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PMPCBO75439 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PMPCBO75439 AC092384.3-202ENST00000564646 2873 ntBASIC16.04■□□□□ 0.16
PMPCBO75439 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PMPCBO75439 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMPCBO75439 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMPCBO75439 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.03■□□□□ 0.16
PMPCBO75439 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.03■□□□□ 0.16
PMPCBO75439 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMPCBO75439 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.03■□□□□ 0.16
PMPCBO75439 AC127383.1-201ENST00000444697 1800 ntBASIC16.03■□□□□ 0.16
PMPCBO75439 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMPCBO75439 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.03■□□□□ 0.16
PMPCBO75439 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMPCBO75439 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PMPCBO75439 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMPCBO75439 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
PMPCBO75439 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMPCBO75439 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMPCBO75439 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.03■□□□□ 0.16
PMPCBO75439 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMPCBO75439 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.03■□□□□ 0.16
PMPCBO75439 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PMPCBO75439 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.03■□□□□ 0.16
PMPCBO75439 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PMPCBO75439 MIR943-201ENST00000401286 94 ntBASIC16.03■□□□□ 0.16
PMPCBO75439 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PMPCBO75439 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.03■□□□□ 0.16
PMPCBO75439 AC106028.4-201ENST00000614509 607 ntBASIC16.03■□□□□ 0.16
PMPCBO75439 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PMPCBO75439 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.03■□□□□ 0.16
PMPCBO75439 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PMPCBO75439 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
PMPCBO75439 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PMPCBO75439 AC090616.6-203ENST00000579186 1945 ntBASIC16.03■□□□□ 0.16
PMPCBO75439 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMPCBO75439 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.03■□□□□ 0.16
PMPCBO75439 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMPCBO75439 AC087481.3-201ENST00000602886 1894 ntBASIC16.03■□□□□ 0.16
PMPCBO75439 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PMPCBO75439 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMPCBO75439 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.03■□□□□ 0.16
PMPCBO75439 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PMPCBO75439 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMPCBO75439 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMPCBO75439 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.03■□□□□ 0.16
PMPCBO75439 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PMPCBO75439 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PMPCBO75439 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PMPCBO75439 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.02■□□□□ 0.16
PMPCBO75439 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PMPCBO75439 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PMPCBO75439 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
PMPCBO75439 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.02■□□□□ 0.16
PMPCBO75439 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.02■□□□□ 0.16
PMPCBO75439 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PMPCBO75439 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PMPCBO75439 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PMPCBO75439 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.02■□□□□ 0.16
PMPCBO75439 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms