Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC079316.1-201ENST00000548397 411 ntBASIC19.48■□□□□ 0.71
CACNA1FO60840 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.48■□□□□ 0.71
CACNA1FO60840 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CACNA1FO60840 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CACNA1FO60840 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC19.47■□□□□ 0.71
CACNA1FO60840 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1FO60840 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CACNA1FO60840 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC19.47■□□□□ 0.71
CACNA1FO60840 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1FO60840 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.47■□□□□ 0.71
CACNA1FO60840 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1FO60840 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CACNA1FO60840 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1FO60840 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1FO60840 CSF2RBP1-201ENST00000447905 391 ntBASIC19.47■□□□□ 0.71
CACNA1FO60840 KRT223P-202ENST00000449164 1292 ntBASIC19.47■□□□□ 0.71
CACNA1FO60840 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC19.47■□□□□ 0.71
CACNA1FO60840 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1FO60840 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC19.47■□□□□ 0.71
CACNA1FO60840 AC145423.3-201ENST00000615987 467 ntBASIC19.47■□□□□ 0.71
CACNA1FO60840 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CACNA1FO60840 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1FO60840 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.47■□□□□ 0.71
CACNA1FO60840 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1FO60840 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1FO60840 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1FO60840 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC19.47■□□□□ 0.71
CACNA1FO60840 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1FO60840 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1FO60840 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
CACNA1FO60840 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CACNA1FO60840 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1FO60840 API5-202ENST00000420461 2009 ntTSL 2 BASIC19.47■□□□□ 0.71
CACNA1FO60840 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
CACNA1FO60840 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC19.46■□□□□ 0.71
CACNA1FO60840 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
CACNA1FO60840 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1FO60840 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CACNA1FO60840 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC19.46■□□□□ 0.71
CACNA1FO60840 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC19.46■□□□□ 0.71
CACNA1FO60840 AC104989.1-201ENST00000519711 778 ntBASIC19.46■□□□□ 0.71
CACNA1FO60840 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC19.46■□□□□ 0.71
CACNA1FO60840 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1FO60840 MIR6805-201ENST00000615055 62 ntBASIC19.46■□□□□ 0.71
CACNA1FO60840 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1FO60840 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CACNA1FO60840 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1FO60840 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
CACNA1FO60840 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1FO60840 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1FO60840 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1FO60840 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1FO60840 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC19.46■□□□□ 0.71
CACNA1FO60840 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1FO60840 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1FO60840 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1FO60840 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1FO60840 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CACNA1FO60840 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1FO60840 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1FO60840 USB1-202ENST00000423271 1217 ntTSL 2 BASIC19.46■□□□□ 0.71
CACNA1FO60840 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.46■□□□□ 0.71
CACNA1FO60840 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.46■□□□□ 0.71
CACNA1FO60840 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC19.46■□□□□ 0.71
CACNA1FO60840 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC19.46■□□□□ 0.71
CACNA1FO60840 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.46■□□□□ 0.71
CACNA1FO60840 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1FO60840 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1FO60840 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.45■□□□□ 0.7
CACNA1FO60840 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CACNA1FO60840 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1FO60840 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1FO60840 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1FO60840 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1FO60840 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC19.45■□□□□ 0.7
CACNA1FO60840 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1FO60840 AC012508.2-201ENST00000567613 1472 ntBASIC19.45■□□□□ 0.7
CACNA1FO60840 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1FO60840 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC19.45■□□□□ 0.7
CACNA1FO60840 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CACNA1FO60840 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CACNA1FO60840 SERF2-209ENST00000409646 559 ntTSL 4 BASIC19.45■□□□□ 0.7
CACNA1FO60840 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1FO60840 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CACNA1FO60840 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1FO60840 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.45■□□□□ 0.7
CACNA1FO60840 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC19.45■□□□□ 0.7
CACNA1FO60840 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.45■□□□□ 0.7
CACNA1FO60840 AP005019.2-201ENST00000615104 511 ntBASIC19.45■□□□□ 0.7
CACNA1FO60840 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CACNA1FO60840 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.45■□□□□ 0.7
CACNA1FO60840 AL138709.1-201ENST00000614840 1693 ntBASIC19.45■□□□□ 0.7
CACNA1FO60840 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1FO60840 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1FO60840 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1FO60840 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC19.45■□□□□ 0.7
CACNA1FO60840 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC19.45■□□□□ 0.7
CACNA1FO60840 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1FO60840 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.45■□□□□ 0.7
CACNA1FO60840 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms