Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 BRI3BPP1-201ENST00000594224 787 ntBASIC14.13□□□□□ -0.15
ZIC3O60481 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ZIC3O60481 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.13□□□□□ -0.15
ZIC3O60481 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.13□□□□□ -0.15
ZIC3O60481 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC3O60481 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ZIC3O60481 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC3O60481 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC3O60481 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC3O60481 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.13□□□□□ -0.15
ZIC3O60481 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.13□□□□□ -0.15
ZIC3O60481 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC3O60481 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ZIC3O60481 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.13□□□□□ -0.15
ZIC3O60481 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
ZIC3O60481 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC3O60481 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC3O60481 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.13□□□□□ -0.15
ZIC3O60481 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ZIC3O60481 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC3O60481 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ZIC3O60481 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC3O60481 AC009090.5-201ENST00000624886 2285 ntBASIC14.12□□□□□ -0.15
ZIC3O60481 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ZIC3O60481 AC092850.2-201ENST00000623821 2697 ntBASIC14.12□□□□□ -0.15
ZIC3O60481 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC3O60481 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.12□□□□□ -0.15
ZIC3O60481 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.12□□□□□ -0.15
ZIC3O60481 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.12□□□□□ -0.15
ZIC3O60481 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC3O60481 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.12□□□□□ -0.15
ZIC3O60481 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ZIC3O60481 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ZIC3O60481 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC3O60481 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC3O60481 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC3O60481 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC3O60481 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.12□□□□□ -0.15
ZIC3O60481 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC3O60481 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ZIC3O60481 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.12□□□□□ -0.15
ZIC3O60481 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.12□□□□□ -0.15
ZIC3O60481 NME2P1-201ENST00000426182 414 ntBASIC14.12□□□□□ -0.15
ZIC3O60481 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.12□□□□□ -0.15
ZIC3O60481 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.12□□□□□ -0.15
ZIC3O60481 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.12□□□□□ -0.15
ZIC3O60481 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC3O60481 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.12□□□□□ -0.15
ZIC3O60481 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC3O60481 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.12□□□□□ -0.15
ZIC3O60481 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.12□□□□□ -0.15
ZIC3O60481 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC3O60481 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.12□□□□□ -0.15
ZIC3O60481 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC3O60481 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC3O60481 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.12□□□□□ -0.15
ZIC3O60481 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.12□□□□□ -0.15
ZIC3O60481 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
ZIC3O60481 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.12□□□□□ -0.15
ZIC3O60481 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.12□□□□□ -0.15
ZIC3O60481 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC3O60481 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.12□□□□□ -0.15
ZIC3O60481 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.12□□□□□ -0.15
ZIC3O60481 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.12□□□□□ -0.15
ZIC3O60481 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC3O60481 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.12□□□□□ -0.15
ZIC3O60481 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ZIC3O60481 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC3O60481 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC3O60481 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC3O60481 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ZIC3O60481 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.12□□□□□ -0.15
ZIC3O60481 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC3O60481 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC3O60481 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC3O60481 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ZIC3O60481 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC3O60481 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
ZIC3O60481 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.11□□□□□ -0.15
ZIC3O60481 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
ZIC3O60481 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
ZIC3O60481 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.11□□□□□ -0.15
ZIC3O60481 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms