Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LDB2O43679 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LDB2O43679 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
LDB2O43679 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LDB2O43679 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LDB2O43679 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LDB2O43679 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LDB2O43679 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
LDB2O43679 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.75■□□□□ 0.11
LDB2O43679 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LDB2O43679 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LDB2O43679 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.75■□□□□ 0.11
LDB2O43679 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LDB2O43679 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LDB2O43679 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.75■□□□□ 0.11
LDB2O43679 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.75■□□□□ 0.11
LDB2O43679 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.75■□□□□ 0.11
LDB2O43679 AC055876.3-201ENST00000431496 288 ntBASIC15.75■□□□□ 0.11
LDB2O43679 AC241585.1-201ENST00000433527 519 ntBASIC15.75■□□□□ 0.11
LDB2O43679 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.75■□□□□ 0.11
LDB2O43679 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LDB2O43679 SLED1-202ENST00000512051 380 ntBASIC15.75■□□□□ 0.11
LDB2O43679 SDHAP3-202ENST00000515467 728 ntBASIC15.75■□□□□ 0.11
LDB2O43679 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.75■□□□□ 0.11
LDB2O43679 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.75■□□□□ 0.11
LDB2O43679 AC044860.1-202ENST00000559481 777 ntBASIC15.75■□□□□ 0.11
LDB2O43679 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LDB2O43679 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.75■□□□□ 0.11
LDB2O43679 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.75■□□□□ 0.11
LDB2O43679 AL390955.2-201ENST00000603032 514 ntBASIC15.75■□□□□ 0.11
LDB2O43679 AC074044.1-201ENST00000609673 707 ntBASIC15.75■□□□□ 0.11
LDB2O43679 AC138649.4-201ENST00000612222 287 ntBASIC15.75■□□□□ 0.11
LDB2O43679 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LDB2O43679 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LDB2O43679 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LDB2O43679 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LDB2O43679 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.75■□□□□ 0.11
LDB2O43679 AC138035.3-201ENST00000622706 2791 ntBASIC15.75■□□□□ 0.11
LDB2O43679 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LDB2O43679 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LDB2O43679 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LDB2O43679 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LDB2O43679 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LDB2O43679 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.74■□□□□ 0.11
LDB2O43679 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LDB2O43679 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
LDB2O43679 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LDB2O43679 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.74■□□□□ 0.11
LDB2O43679 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LDB2O43679 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.74■□□□□ 0.11
LDB2O43679 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LDB2O43679 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.74■□□□□ 0.11
LDB2O43679 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
LDB2O43679 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LDB2O43679 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.74■□□□□ 0.11
LDB2O43679 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
LDB2O43679 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LDB2O43679 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LDB2O43679 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.74■□□□□ 0.11
LDB2O43679 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.74■□□□□ 0.11
LDB2O43679 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LDB2O43679 AC009477.1-201ENST00000452936 217 ntBASIC15.74■□□□□ 0.11
LDB2O43679 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LDB2O43679 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.74■□□□□ 0.11
LDB2O43679 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.74■□□□□ 0.11
LDB2O43679 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.74■□□□□ 0.11
LDB2O43679 AC011467.4-201ENST00000594891 528 ntBASIC15.74■□□□□ 0.11
LDB2O43679 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.74■□□□□ 0.11
LDB2O43679 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LDB2O43679 AC006486.2-201ENST00000624246 2199 ntBASIC15.74■□□□□ 0.11
LDB2O43679 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LDB2O43679 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.74■□□□□ 0.11
LDB2O43679 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.74■□□□□ 0.11
LDB2O43679 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.74■□□□□ 0.11
LDB2O43679 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LDB2O43679 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LDB2O43679 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
LDB2O43679 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LDB2O43679 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LDB2O43679 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.74■□□□□ 0.11
LDB2O43679 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.74■□□□□ 0.11
LDB2O43679 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.74■□□□□ 0.11
LDB2O43679 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LDB2O43679 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.74■□□□□ 0.11
LDB2O43679 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LDB2O43679 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LDB2O43679 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LDB2O43679 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.73■□□□□ 0.11
LDB2O43679 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.73■□□□□ 0.11
LDB2O43679 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.73■□□□□ 0.11
LDB2O43679 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LDB2O43679 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LDB2O43679 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LDB2O43679 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LDB2O43679 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LDB2O43679 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
LDB2O43679 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LDB2O43679 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LDB2O43679 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LDB2O43679 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms