Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RIPK2O43353 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RIPK2O43353 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RIPK2O43353 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.04■□□□□ 0.16
RIPK2O43353 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.04■□□□□ 0.16
RIPK2O43353 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RIPK2O43353 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RIPK2O43353 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RIPK2O43353 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RIPK2O43353 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.04■□□□□ 0.16
RIPK2O43353 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.04■□□□□ 0.16
RIPK2O43353 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RIPK2O43353 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RIPK2O43353 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.04■□□□□ 0.16
RIPK2O43353 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
RIPK2O43353 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RIPK2O43353 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RIPK2O43353 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RIPK2O43353 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.04■□□□□ 0.16
RIPK2O43353 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.04■□□□□ 0.16
RIPK2O43353 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.04■□□□□ 0.16
RIPK2O43353 SPTSSB-204ENST00000617024 1292 ntBASIC16.04■□□□□ 0.16
RIPK2O43353 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.04■□□□□ 0.16
RIPK2O43353 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
RIPK2O43353 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RIPK2O43353 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.04■□□□□ 0.16
RIPK2O43353 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RIPK2O43353 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RIPK2O43353 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RIPK2O43353 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RIPK2O43353 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RIPK2O43353 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RIPK2O43353 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.04■□□□□ 0.16
RIPK2O43353 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.04■□□□□ 0.16
RIPK2O43353 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RIPK2O43353 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RIPK2O43353 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RIPK2O43353 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RIPK2O43353 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.03■□□□□ 0.16
RIPK2O43353 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.03■□□□□ 0.16
RIPK2O43353 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RIPK2O43353 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.03■□□□□ 0.16
RIPK2O43353 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RIPK2O43353 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RIPK2O43353 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RIPK2O43353 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RIPK2O43353 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.03■□□□□ 0.16
RIPK2O43353 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.03■□□□□ 0.16
RIPK2O43353 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
RIPK2O43353 AC098831.1-202ENST00000438821 336 ntBASIC16.03■□□□□ 0.16
RIPK2O43353 PHKG1P2-201ENST00000457537 863 ntBASIC16.03■□□□□ 0.16
RIPK2O43353 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.03■□□□□ 0.16
RIPK2O43353 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.03■□□□□ 0.16
RIPK2O43353 UNC93B7-201ENST00000509439 705 ntBASIC16.03■□□□□ 0.16
RIPK2O43353 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.03■□□□□ 0.16
RIPK2O43353 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.03■□□□□ 0.16
RIPK2O43353 AL138918.1-201ENST00000568306 659 ntBASIC16.03■□□□□ 0.16
RIPK2O43353 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.03■□□□□ 0.16
RIPK2O43353 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.03■□□□□ 0.16
RIPK2O43353 AL161645.1-201ENST00000622716 1255 ntBASIC16.03■□□□□ 0.16
RIPK2O43353 AC012313.10-201ENST00000623509 926 ntBASIC16.03■□□□□ 0.16
RIPK2O43353 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.03■□□□□ 0.16
RIPK2O43353 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RIPK2O43353 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
RIPK2O43353 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RIPK2O43353 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RIPK2O43353 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RIPK2O43353 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.03■□□□□ 0.16
RIPK2O43353 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RIPK2O43353 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RIPK2O43353 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.03■□□□□ 0.16
RIPK2O43353 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RIPK2O43353 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RIPK2O43353 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.02■□□□□ 0.16
RIPK2O43353 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RIPK2O43353 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RIPK2O43353 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RIPK2O43353 WASH3P-207ENST00000560956 1394 ntBASIC16.02■□□□□ 0.16
RIPK2O43353 FO538757.1-201ENST00000623083 1397 ntBASIC16.02■□□□□ 0.16
RIPK2O43353 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.02■□□□□ 0.16
RIPK2O43353 ACE3P-201ENST00000423435 1973 ntBASIC16.02■□□□□ 0.16
RIPK2O43353 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.02■□□□□ 0.16
RIPK2O43353 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RIPK2O43353 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RIPK2O43353 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RIPK2O43353 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RIPK2O43353 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.02■□□□□ 0.16
RIPK2O43353 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RIPK2O43353 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
RIPK2O43353 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.02■□□□□ 0.16
RIPK2O43353 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.02■□□□□ 0.16
RIPK2O43353 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.02■□□□□ 0.16
RIPK2O43353 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.02■□□□□ 0.16
RIPK2O43353 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RIPK2O43353 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.02■□□□□ 0.16
RIPK2O43353 AL121912.1-201ENST00000603683 238 ntBASIC16.02■□□□□ 0.16
RIPK2O43353 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.02■□□□□ 0.16
RIPK2O43353 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.02■□□□□ 0.16
RIPK2O43353 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
RIPK2O43353 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms