Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC10.85□□□□□ -0.67
NDUFA1O15239 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC10.85□□□□□ -0.67
NDUFA1O15239 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
NDUFA1O15239 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC10.85□□□□□ -0.67
NDUFA1O15239 AC092127.1-201ENST00000567093 3455 ntBASIC10.85□□□□□ -0.67
NDUFA1O15239 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC10.85□□□□□ -0.67
NDUFA1O15239 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC10.85□□□□□ -0.67
NDUFA1O15239 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC10.85□□□□□ -0.67
NDUFA1O15239 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
NDUFA1O15239 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
NDUFA1O15239 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC10.85□□□□□ -0.67
NDUFA1O15239 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 CD99-202ENST00000381180 530 ntTSL 2 BASIC10.85□□□□□ -0.67
NDUFA1O15239 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC10.85□□□□□ -0.67
NDUFA1O15239 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
NDUFA1O15239 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC10.85□□□□□ -0.67
NDUFA1O15239 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC10.85□□□□□ -0.67
NDUFA1O15239 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
NDUFA1O15239 MOK-208ENST00000519058 917 ntTSL 2 BASIC10.85□□□□□ -0.67
NDUFA1O15239 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC10.85□□□□□ -0.67
NDUFA1O15239 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC10.85□□□□□ -0.67
NDUFA1O15239 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC10.85□□□□□ -0.67
NDUFA1O15239 EHF-205ENST00000527935 557 ntTSL 2 BASIC10.85□□□□□ -0.67
NDUFA1O15239 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC10.85□□□□□ -0.67
NDUFA1O15239 MIR4515-201ENST00000584082 81 ntBASIC10.85□□□□□ -0.67
NDUFA1O15239 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
NDUFA1O15239 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC10.85□□□□□ -0.67
NDUFA1O15239 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
NDUFA1O15239 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC10.85□□□□□ -0.67
NDUFA1O15239 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC10.85□□□□□ -0.67
NDUFA1O15239 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC10.85□□□□□ -0.67
NDUFA1O15239 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
NDUFA1O15239 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
NDUFA1O15239 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
NDUFA1O15239 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC10.84□□□□□ -0.67
NDUFA1O15239 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
NDUFA1O15239 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
NDUFA1O15239 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
NDUFA1O15239 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
NDUFA1O15239 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
NDUFA1O15239 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 AC007686.3-201ENST00000619017 3487 ntBASIC10.84□□□□□ -0.67
NDUFA1O15239 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
NDUFA1O15239 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
NDUFA1O15239 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
NDUFA1O15239 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC10.84□□□□□ -0.67
NDUFA1O15239 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 UCKL1-AS1-201ENST00000623569 3602 ntBASIC10.84□□□□□ -0.67
NDUFA1O15239 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC10.84□□□□□ -0.67
NDUFA1O15239 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
NDUFA1O15239 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 NME2-201ENST00000393183 568 ntTSL 2 BASIC10.84□□□□□ -0.67
NDUFA1O15239 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC10.84□□□□□ -0.67
NDUFA1O15239 VMO1-203ENST00000416307 712 ntTSL 2 BASIC10.84□□□□□ -0.67
NDUFA1O15239 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC10.84□□□□□ -0.67
NDUFA1O15239 DUSP5P1-201ENST00000441325 1139 ntBASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms