Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.23■□□□□ 0.03
SNPHO15079 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNPHO15079 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SNPHO15079 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNPHO15079 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNPHO15079 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.23■□□□□ 0.03
SNPHO15079 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNPHO15079 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNPHO15079 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.23■□□□□ 0.03
SNPHO15079 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.22■□□□□ 0.03
SNPHO15079 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.22■□□□□ 0.03
SNPHO15079 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 AC006058.4-201ENST00000624016 1670 ntBASIC15.22■□□□□ 0.03
SNPHO15079 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.22■□□□□ 0.03
SNPHO15079 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.22■□□□□ 0.03
SNPHO15079 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SNPHO15079 AL645728.1-201ENST00000366221 2101 ntBASIC15.22■□□□□ 0.03
SNPHO15079 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.22■□□□□ 0.03
SNPHO15079 AC104581.4-201ENST00000623126 3052 ntBASIC15.22■□□□□ 0.03
SNPHO15079 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.22■□□□□ 0.03
SNPHO15079 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.22■□□□□ 0.03
SNPHO15079 AL359918.2-201ENST00000412311 497 ntTSL 3 BASIC15.22■□□□□ 0.03
SNPHO15079 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 AL355306.1-201ENST00000415580 579 ntBASIC15.22■□□□□ 0.03
SNPHO15079 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
SNPHO15079 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 AP006288.1-201ENST00000446065 395 ntBASIC15.22■□□□□ 0.03
SNPHO15079 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.22■□□□□ 0.03
SNPHO15079 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC15.22■□□□□ 0.03
SNPHO15079 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.22■□□□□ 0.03
SNPHO15079 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC15.22■□□□□ 0.03
SNPHO15079 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.22■□□□□ 0.03
SNPHO15079 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SNPHO15079 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.22■□□□□ 0.03
SNPHO15079 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SNPHO15079 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
SNPHO15079 AC084824.3-201ENST00000620472 856 ntBASIC15.22■□□□□ 0.03
SNPHO15079 AC136428.4-201ENST00000634254 1155 ntBASIC15.22■□□□□ 0.03
SNPHO15079 AL139011.1-202ENST00000642063 584 ntBASIC15.22■□□□□ 0.03
SNPHO15079 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.22■□□□□ 0.03
SNPHO15079 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.22■□□□□ 0.03
SNPHO15079 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SNPHO15079 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SNPHO15079 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNPHO15079 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNPHO15079 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNPHO15079 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SNPHO15079 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.21■□□□□ 0.03
SNPHO15079 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNPHO15079 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
SNPHO15079 SBF1P1-201ENST00000444527 5631 ntBASIC15.21■□□□□ 0.03
SNPHO15079 SNX33P1-201ENST00000592116 1762 ntBASIC15.21■□□□□ 0.03
SNPHO15079 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNPHO15079 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.21■□□□□ 0.03
SNPHO15079 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNPHO15079 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SNPHO15079 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.21■□□□□ 0.03
SNPHO15079 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNPHO15079 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SNPHO15079 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.21■□□□□ 0.03
SNPHO15079 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.21■□□□□ 0.03
SNPHO15079 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNPHO15079 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.21■□□□□ 0.03
SNPHO15079 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNPHO15079 KRT8P39-201ENST00000396270 1433 ntBASIC15.21■□□□□ 0.03
SNPHO15079 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.21■□□□□ 0.03
SNPHO15079 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNPHO15079 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.21■□□□□ 0.03
SNPHO15079 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNPHO15079 PYM1-202ENST00000398213 1073 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms