Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.98□□□□□ -0.01
UPK1AO00322 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
UPK1AO00322 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
UPK1AO00322 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 KRT8P44-201ENST00000441609 1350 ntBASIC14.98□□□□□ -0.01
UPK1AO00322 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.98□□□□□ -0.01
UPK1AO00322 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.98□□□□□ -0.01
UPK1AO00322 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.97□□□□□ -0.01
UPK1AO00322 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
UPK1AO00322 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
UPK1AO00322 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
UPK1AO00322 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.97□□□□□ -0.01
UPK1AO00322 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
UPK1AO00322 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.97□□□□□ -0.01
UPK1AO00322 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 REXO1L1P-202ENST00000608646 1974 ntBASIC14.97□□□□□ -0.01
UPK1AO00322 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.97□□□□□ -0.01
UPK1AO00322 AL353705.2-201ENST00000428243 662 ntBASIC14.97□□□□□ -0.01
UPK1AO00322 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.97□□□□□ -0.01
UPK1AO00322 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.97□□□□□ -0.01
UPK1AO00322 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
UPK1AO00322 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
UPK1AO00322 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
UPK1AO00322 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
UPK1AO00322 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
UPK1AO00322 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1AO00322 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1AO00322 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
UPK1AO00322 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.96□□□□□ -0.01
UPK1AO00322 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1AO00322 AC005912.2-201ENST00000619492 2400 ntBASIC14.96□□□□□ -0.01
UPK1AO00322 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
UPK1AO00322 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1AO00322 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
UPK1AO00322 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
UPK1AO00322 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1AO00322 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1AO00322 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
UPK1AO00322 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
UPK1AO00322 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1AO00322 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.96□□□□□ -0.01
UPK1AO00322 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1AO00322 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1AO00322 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1AO00322 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1AO00322 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
UPK1AO00322 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1AO00322 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.96□□□□□ -0.01
UPK1AO00322 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1AO00322 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
UPK1AO00322 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1AO00322 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.96□□□□□ -0.01
UPK1AO00322 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.96□□□□□ -0.01
UPK1AO00322 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
UPK1AO00322 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
UPK1AO00322 BANF1P1-201ENST00000553684 263 ntBASIC14.96□□□□□ -0.01
UPK1AO00322 SNHG9-202ENST00000564014 471 ntBASIC14.96□□□□□ -0.01
UPK1AO00322 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.96□□□□□ -0.01
UPK1AO00322 AL596442.2-201ENST00000610240 980 ntBASIC14.96□□□□□ -0.01
UPK1AO00322 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1AO00322 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.96□□□□□ -0.01
UPK1AO00322 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1AO00322 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1AO00322 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1AO00322 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.96□□□□□ -0.01
UPK1AO00322 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1AO00322 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
UPK1AO00322 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.96□□□□□ -0.02
UPK1AO00322 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.96□□□□□ -0.02
UPK1AO00322 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
UPK1AO00322 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
UPK1AO00322 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
UPK1AO00322 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms