Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC007292.2-201ENST00000593524 1812 ntBASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC073439.1-201ENST00000624121 1774 ntBASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC007686.3-201ENST00000619017 3487 ntBASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 HAUS4P1-201ENST00000406739 1145 ntBASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC068137.2-201ENST00000605408 478 ntBASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 TCAF2P1-201ENST00000291129 2421 ntBASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF103-CHMP3A0A140T963 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC008677.1-201ENST00000519230 1561 ntBASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 WASH6P-202ENST00000359512 1437 ntBASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 KRT18P2-201ENST00000447938 1258 ntBASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 RPL13AP23-201ENST00000480739 586 ntBASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms