Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 AC007787.1-201ENST00000588095 1583 ntBASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 RGS5-214ENST00000429865 754 ntTSL 3 BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 PTPA-217ENST00000434095 870 ntTSL 2 BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 NCK2-206ENST00000522586 490 ntTSL 5 BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
LOC102724428A0A0B4J2F2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 AL645937.2-201ENST00000396808 931 ntBASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 POM121L8P-201ENST00000417732 1281 ntBASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 EIF3FP3-201ENST00000434851 1086 ntBASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 POM121L9P-203ENST00000441984 1285 ntBASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 TMEM198B-204ENST00000484016 896 ntBASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 OR10B1P-201ENST00000601666 907 ntBASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 TUBBP5-203ENST00000508529 1334 ntBASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC19.74■□□□□ 0.75
LOC102724428A0A0B4J2F2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 AL158070.2-201ENST00000623713 1621 ntBASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 HLA-DQB2-229ENST00000411527 1059 ntBASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 RPS2P36-201ENST00000456516 831 ntBASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 ZACNP1-201ENST00000612259 710 ntBASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LOC102724428A0A0B4J2F2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms