Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 AC098614.1-201ENST00000368528 745 ntBASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 SPDYE17-201ENST00000412399 783 ntBASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHB1Q9Y5F3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 AC132872.4-202ENST00000622924 2756 ntBASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 AC046158.3-201ENST00000624947 2558 ntBASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 FO393414.2-201ENST00000405153 598 ntBASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 WASH4P-201ENST00000564273 1246 ntBASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 AC132938.2-201ENST00000579188 680 ntBASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 AL133215.2-201ENST00000609242 977 ntBASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 AC004790.1-201ENST00000612686 536 ntBASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 AL591163.1-201ENST00000641757 987 ntBASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHB1Q9Y5F3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.77■□□□□ 0.11
PCDHB1Q9Y5F3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHB1Q9Y5F3 AP003680.1-201ENST00000598970 3660 ntBASIC15.77■□□□□ 0.11
PCDHB1Q9Y5F3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHB1Q9Y5F3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHB1Q9Y5F3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.77■□□□□ 0.11
PCDHB1Q9Y5F3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHB1Q9Y5F3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHB1Q9Y5F3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PCDHB1Q9Y5F3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
PCDHB1Q9Y5F3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms